RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CUEDC2Q9H467 287 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 DAAM1Q9Y4D1 1078 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 ZNF202O95125 648 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 PHLDB2Q86SQ0 1253 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 KCNH5Q8NCM2 988 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC26Q8TAB7 109 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 FBXO41Q8TF61 875 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 SAAL1Q96ER3 474 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 CAPZA3Q96KX2 299 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 TXLNGQ9NUQ3 528 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 ZBTB12Q9Y330 459 aaPredicted RBP7.34□□□□□ -1.23
TRIM38-201ENST00000357085 SLC12A7Q9Y666 1083 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 CALML3P27482 149 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 USP5P45974 858 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC96Q2M329 555 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 UBAC1Q9BSL1 405 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 PTPDC1A2A3K4 754 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 ANXA13P27216 316 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 CPLX4Q7Z7G2 160 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 KCNH3Q9ULD8 1083 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 PREX1Q8TCU6 1659 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 EIF2S2P20042 333 aaKnown RBP7.34□□□□□ -1.23
TRIM38-201ENST00000357085 ZNF526Q8TF50 670 aaPredicted RBP7.34□□□□□ -1.23
TRIM38-201ENST00000357085 VCX3AQ9NNX9 186 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 STRN4Q9NRL3 753 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 A0A0G2JS52 829 aa7.34□□□□□ -1.24
TRIM38-201ENST00000357085 GRID2IPA4D2P6 1211 aa7.34□□□□□ -1.24
TRIM38-201ENST00000357085 SART1O43290 800 aaKnown RBP7.34□□□□□ -1.24
TRIM38-201ENST00000357085 ARID5BQ14865 1188 aa7.34□□□□□ -1.24
TRIM38-201ENST00000357085 CCDC122Q5T0U0 273 aa7.34□□□□□ -1.24
TRIM38-201ENST00000357085 WDR93Q6P2C0 686 aa7.34□□□□□ -1.24
TRIM38-201ENST00000357085 MAML3Q96JK9 1138 aa7.34□□□□□ -1.24
TRIM38-201ENST00000357085 GUCA1BQ9UMX6 200 aa7.34□□□□□ -1.24
TRIM38-201ENST00000357085 LMNAP02545 664 aaKnown RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 IDEP14735 1019 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 MKRN3Q13064 507 aaKnown RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 MTX1Q13505 466 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 DDX54Q8TDD1 881 aaKnown RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 ABLIM1O14639 778 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 LIN7AO14910 233 aaPredicted RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 PPP6R2O75170 966 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 METAP2P50579 478 aaKnown RBP eCLIP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 LINS1Q8NG48 757 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 CCDC42Q96M95 316 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 GSDMAQ96QA5 445 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 KLHL10Q6JEL2 608 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 PPFIBP2Q8ND30 876 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 CTNNBL1Q8WYA6 563 aaPredicted RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 TBC1D31Q96DN5 1066 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 HOOK2Q96ED9 719 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 FAM212AQ96EL1 285 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 TMEM87BQ96K49 555 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 IRAK4Q9NWZ3 460 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 LCMT1Q9UIC8 334 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 CASP14P31944 242 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 TEX9Q8N6V9 391 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 MYH10P35580 1976 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 FOXP2O15409 715 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 ME3Q16798 604 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 CARD10Q9BWT7 1032 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 SLC27A2O14975 620 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 DNAJC8O75937 253 aaPredicted RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 IARSP41252 1262 aaKnown RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 TRAPPC10P48553 1259 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 DDX46Q7L014 1031 aaKnown RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 RAB17Q9H0T7 212 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 E7EVH7 732 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 HNRNPH1P31943 449 aaKnown RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 TRAF1Q13077 416 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 DHX40Q8IX18 779 aaKnown RBP7.33□□□□□ -1.24
TRIM38-201ENST00000357085 NECTIN2Q92692 538 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 DHX58Q96C10 678 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 KLC4Q9NSK0 619 aa7.33□□□□□ -1.24
TRIM38-201ENST00000357085 ANKARQ7Z5J8 1434 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 SEPT6Q14141 434 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 TRIM75PA6NK02 468 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 AKR1B10O60218 316 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 MRPS25P82663 173 aaKnown RBP7.32□□□□□ -1.24
TRIM38-201ENST00000357085 NR1H3Q13133 447 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 MAP3K21Q5TCX8 1036 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 ZNF579Q8NAF0 562 aaKnown RBP7.32□□□□□ -1.24
TRIM38-201ENST00000357085 C19orf44Q9H6X5 657 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 KDM6AO15550 1401 aaPredicted RBP7.32□□□□□ -1.24
TRIM38-201ENST00000357085 AARSP49588 968 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRIM38-201ENST00000357085 PSEN1P49768 467 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 TMEM266Q2M3C6 531 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 E4F1Q66K89 784 aaPredicted RBP7.32□□□□□ -1.24
TRIM38-201ENST00000357085 RIC3Q7Z5B4 369 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 SMC1BQ8NDV3 1235 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 MAGEC3Q8TD91 643 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 OSBPL9Q96SU4 736 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 E7ENQ6 273 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 HSP90AA5PQ58FG0 334 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 FUCA2Q9BTY2 467 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 FUT8Q9BYC5 575 aa7.32□□□□□ -1.24
TRIM38-201ENST00000357085 BZW2Q9Y6E2 419 aaKnown RBP7.32□□□□□ -1.24
TRIM38-201ENST00000357085 POLA2Q14181 598 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms