RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 EPN3Q9H201 632 aa17.75■□□□□ 0.43
RTN3-205ENST00000356000 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
RTN3-205ENST00000356000 SMNDC1O75940 238 aaKnown RBP eCLIP17.75■□□□□ 0.43
RTN3-205ENST00000356000 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
RTN3-205ENST00000356000 RAD9BQ6WBX8 426 aa17.75■□□□□ 0.43
RTN3-205ENST00000356000 ZNF473Q8WTR7 871 aaKnown RBP17.75■□□□□ 0.43
RTN3-205ENST00000356000 C14orf93Q9H972 538 aaKnown RBP17.75■□□□□ 0.43
RTN3-205ENST00000356000 CHCHD3Q9NX63 227 aaKnown RBP17.75■□□□□ 0.43
RTN3-205ENST00000356000 PDIA5Q14554 519 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 ARMC3Q5W041 872 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 NCAPH2Q6IBW4 605 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 RASGRP2Q7LDG7 609 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 EBF2Q9HAK2 575 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 TUBE1Q9UJT0 475 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 TRPC6Q9Y210 931 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
RTN3-205ENST00000356000 OPA1O60313 960 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 ACCSLQ4AC99 568 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 CCNI2Q6ZMN8 369 aaPredicted RBP17.74■□□□□ 0.43
RTN3-205ENST00000356000 NAA15Q9BXJ9 866 aaKnown RBP17.74■□□□□ 0.43
RTN3-205ENST00000356000 TNS3Q68CZ2 1445 aa17.74■□□□□ 0.43
RTN3-205ENST00000356000 SSBP05455 408 aaKnown RBP eCLIP17.73■□□□□ 0.43
RTN3-205ENST00000356000 MAGEA8P43361 318 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 G2E3Q7L622 706 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 RHPN1Q8TCX5 695 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 RTEL1Q9NZ71 1219 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 MYO1AQ9UBC5 1043 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 CORO1CQ9ULV4 474 aaPredicted RBP17.73■□□□□ 0.43
RTN3-205ENST00000356000 ERICH2A1L162 156 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 CHL1O00533 1208 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 MGRN1O60291 552 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 IFT88Q13099 833 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 SPATA31A3Q5VYP0 1347 aa17.73■□□□□ 0.43
RTN3-205ENST00000356000 H7C1W4 665 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 LSP1P33241 339 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 MFN1Q8IWA4 741 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 CCDC47Q96A33 483 aaKnown RBP17.72■□□□□ 0.43
RTN3-205ENST00000356000 OSBPL9Q96SU4 736 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
RTN3-205ENST00000356000 PYGLP06737 847 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 NBPF7P0C2Y1 421 aaPredicted RBP17.72■□□□□ 0.43
RTN3-205ENST00000356000 NSMCE1Q8WV22 266 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 SPAG5Q96R06 1193 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 SIL1Q9H173 461 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 LMCD1Q9NZU5 365 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
RTN3-205ENST00000356000 BCL9LQ86UU0 1499 aa17.72■□□□□ 0.43
RTN3-205ENST00000356000 GLRX3O76003 335 aaKnown RBP17.71■□□□□ 0.43
RTN3-205ENST00000356000 CWF19L1Q69YN2 538 aaKnown RBP17.71■□□□□ 0.43
RTN3-205ENST00000356000 AENQ8WTP8 325 aaKnown RBP17.71■□□□□ 0.43
RTN3-205ENST00000356000 PSMD1Q99460 953 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 LLPHQ9BRT6 129 aaKnown RBP17.71■□□□□ 0.43
RTN3-205ENST00000356000 HAUS2Q9NVX0 235 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 TTF2Q9UNY4 1162 aaKnown RBP17.71■□□□□ 0.43
RTN3-205ENST00000356000 MAP3K5Q99683 1374 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
RTN3-205ENST00000356000 XRCC4Q13426 336 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 TTMPQ5BVD1 217 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 CCDC121Q6ZUS5 278 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.43
RTN3-205ENST00000356000 SLMAPQ14BN4 828 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 CCDC181Q5TID7 509 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 SLC30A9Q6PML9 568 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 EZH1Q92800 747 aaPredicted RBP17.7■□□□□ 0.42
RTN3-205ENST00000356000 FAM184BQ9ULE4 1060 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.7■□□□□ 0.42
RTN3-205ENST00000356000 PCDHGC5Q9Y5F6 944 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 ABCA3Q99758 1704 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 CEMIPQ8WUJ3 1361 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 TAX1BP1Q86VP1 789 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 TRIM58Q8NG06 486 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 MYCBPAPQ8TBZ2 947 aa17.7■□□□□ 0.42
RTN3-205ENST00000356000 SRRM3A6NNA2 597 aaPredicted RBP17.69■□□□□ 0.42
RTN3-205ENST00000356000 LIN7AO14910 233 aaPredicted RBP17.69■□□□□ 0.42
RTN3-205ENST00000356000 NBPF14Q5TI25 921 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 EMC10Q5UCC4 262 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 TRAPPC11Q7Z392 1133 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 GSPT2Q8IYD1 628 aaKnown RBP17.69■□□□□ 0.42
RTN3-205ENST00000356000 ARL8AQ96BM9 186 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 RPGRIP1Q96KN7 1286 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 CCT8L2Q96SF2 557 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 LAMB3Q13751 1172 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 PTGISQ16647 500 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 KDM7AQ6ZMT4 941 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 UBE3BQ7Z3V4 1068 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 TBC1D2BQ9UPU7 963 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 RIPOR2Q9Y4F9 1068 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 TAF6LQ9Y6J9 622 aa17.69■□□□□ 0.42
RTN3-205ENST00000356000 DNM1LO00429 736 aa17.68■□□□□ 0.42
RTN3-205ENST00000356000 IMPDH2P12268 514 aa17.68■□□□□ 0.42
RTN3-205ENST00000356000 IL13P35225 146 aa17.68■□□□□ 0.42
RTN3-205ENST00000356000 NLRP14Q86W24 1093 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms