RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 NBPF14Q5TI25 921 aa17.31■□□□□ 0.36
VAT1-201ENST00000355653 NBPF10Q6P3W6 841 aaKnown RBP17.31■□□□□ 0.36
VAT1-201ENST00000355653 CMTR1Q8N1G2 835 aaKnown RBP17.31■□□□□ 0.36
VAT1-201ENST00000355653 NBPF15Q8N660 670 aa17.31■□□□□ 0.36
VAT1-201ENST00000355653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
VAT1-201ENST00000355653 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
VAT1-201ENST00000355653 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
VAT1-201ENST00000355653 NR5A1Q13285 461 aa17.31■□□□□ 0.36
VAT1-201ENST00000355653 RASGRP2Q7LDG7 609 aa17.31■□□□□ 0.36
VAT1-201ENST00000355653 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
VAT1-201ENST00000355653 EIF3CLB5ME19 914 aaKnown RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 IDH1O75874 414 aaKnown RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 PTPREP23469 700 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 FAM71BQ8TC56 605 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 EIF3CQ99613 913 aaKnown RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 MEGF6O75095 1541 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 ACTN4O43707 911 aaKnown RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 CIAO1O76071 339 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 CABP4P57796 275 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 TTC31Q49AM3 519 aaPredicted RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 APTXQ7Z2E3 356 aaKnown RBP17.3■□□□□ 0.36
VAT1-201ENST00000355653 GBP3Q9H0R5 595 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
VAT1-201ENST00000355653 GYPCP04921 128 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 ERCC5P28715 1186 aaPredicted RBP17.29■□□□□ 0.36
VAT1-201ENST00000355653 FILIP1LQ4L180 1135 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 LRRC31Q6UY01 552 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 PACS2Q86VP3 889 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 TRIML1Q8N9V2 468 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.29■□□□□ 0.36
VAT1-201ENST00000355653 LY9Q9HBG7 655 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 IFIT3O14879 490 aaKnown RBP17.29■□□□□ 0.36
VAT1-201ENST00000355653 MMP1P03956 469 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 CDC25AP30304 524 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 SPATA1Q5VX52 437 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 IGDCC4Q8TDY8 1250 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 GDAP1L1Q96MZ0 367 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 ACBD3Q9H3P7 528 aa17.29■□□□□ 0.36
VAT1-201ENST00000355653 ADD3Q9UEY8 706 aaKnown RBP17.29■□□□□ 0.36
VAT1-201ENST00000355653 A1BGP04217 495 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 GTF2A1P52655 376 aaPredicted RBP17.28■□□□□ 0.36
VAT1-201ENST00000355653 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 IRX3P78415 501 aaPredicted RBP17.28■□□□□ 0.36
VAT1-201ENST00000355653 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
VAT1-201ENST00000355653 RNF40O75150 1001 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 MAGEA9P43362 315 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 CNGA4Q8IV77 575 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
VAT1-201ENST00000355653 NUP88Q99567 741 aaPredicted RBP17.28■□□□□ 0.36
VAT1-201ENST00000355653 SLF1Q9BQI6 1058 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 ZKSCAN3Q9BRR0 538 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
VAT1-201ENST00000355653 MCAMP43121 646 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 ERVK-24P63145 666 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 CTDSPL2Q05D32 466 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 WHAMMP3Q1A5X7 153 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.36
VAT1-201ENST00000355653 KANK3Q6NY19 840 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 STAMQ92783 540 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 EPSTI1Q96J88 318 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 SPEF2Q9C093 1822 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 ENC1O14682 589 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.36
VAT1-201ENST00000355653 TUBB2AQ13885 445 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 RILPL1Q5EBL4 403 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 OXER1Q8TDS5 423 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 TMEM87BQ96K49 555 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 TUBB2BQ9BVA1 445 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 CABP5Q9NP86 173 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 MKRN1Q9UHC7 482 aaKnown RBP17.27■□□□□ 0.36
VAT1-201ENST00000355653 MYO6Q9UM54 1294 aa17.27■□□□□ 0.36
VAT1-201ENST00000355653 TRIM10Q9UDY6 481 aa17.27■□□□□ 0.35
VAT1-201ENST00000355653 GUCA1BQ9UMX6 200 aa17.27■□□□□ 0.35
VAT1-201ENST00000355653 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.35
VAT1-201ENST00000355653 SCN11AQ9UI33 1791 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 A0A087X0B3 334 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 RPS6KA5O75582 802 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 ICE2Q659A1 982 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 TRIM22Q8IYM9 498 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 CCDC148Q8NFR7 591 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 WASF1Q92558 559 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 VPS16Q9H269 839 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 ECM29Q5VYK3 1845 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 N4BP3O15049 544 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 ADD2P35612 726 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 PBX1P40424 430 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 RIN2Q8WYP3 895 aaPredicted RBP17.26■□□□□ 0.35
VAT1-201ENST00000355653 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 MED4Q9NPJ6 270 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 HDAC6Q9UBN7 1215 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 SRPRBQ9Y5M8 271 aaKnown RBP17.26■□□□□ 0.35
VAT1-201ENST00000355653 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
VAT1-201ENST00000355653 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms