RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CSRNP2Q9H175 543 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 BLZF1Q9H2G9 400 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 USP40Q9NVE5 1235 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 PPIP5K2O43314 1243 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 EXOC3O60645 756 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 EVCP57679 992 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 CABP7Q86V35 215 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 GPR161Q8N6U8 529 aaKnown RBP14.73□□□□□ -0.05
SCN8A-202ENST00000355133 TIGD1Q96MW7 591 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 IBTKQ9P2D0 1353 aaPredicted RBP14.73□□□□□ -0.05
SCN8A-202ENST00000355133 CCDC160A6NGH7 325 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 JAK2O60674 1132 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 GEN1Q17RS7 908 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 NBPF11Q86T75 865 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 MICALL1Q8N3F8 863 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 NAPGQ99747 312 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-202ENST00000355133 HAUS7Q99871 368 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 MRPL44Q9H9J2 332 aaKnown RBP14.72□□□□□ -0.05
SCN8A-202ENST00000355133 SAMD15Q9P1V8 674 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 TUBB4BP68371 445 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 EAPPQ56P03 285 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-202ENST00000355133 CDAN1Q8IWY9 1227 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 EDC3Q96F86 508 aaKnown RBP14.72□□□□□ -0.05
SCN8A-202ENST00000355133 NAP1L3Q99457 506 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-202ENST00000355133 TRIM31Q9BZY9 425 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 RBSNQ9H1K0 784 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 ALDH3A1P30838 453 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 EIF4A1P60842 406 aaKnown RBP14.72□□□□□ -0.05
SCN8A-202ENST00000355133 PPP2R5DQ14738 602 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 CDC37L1Q7L3B6 337 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 HOOK2Q96ED9 719 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 NKIRAS1Q9NYS0 192 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 CTTNBP2NLQ9P2B4 639 aa14.72□□□□□ -0.05
SCN8A-202ENST00000355133 E7EWF7 191 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 CRCPO75575 148 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 FAM76AQ8TAV0 307 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 HPDP32754 393 aaPredicted RBP14.71□□□□□ -0.05
SCN8A-202ENST00000355133 IRX3P78415 501 aaPredicted RBP14.71□□□□□ -0.05
SCN8A-202ENST00000355133 PPARAQ07869 468 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 ZNF365Q70YC5 407 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 ARFGAP2Q8N6H7 521 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 NOX5Q96PH1 765 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 SETDB1Q15047 1291 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 C8orf74Q6P047 294 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 UBL4BQ8N7F7 174 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 NELFBQ8WX92 580 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 LZTS2Q9BRK4 669 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.05
SCN8A-202ENST00000355133 TTF2Q9UNY4 1162 aaKnown RBP14.71□□□□□ -0.05
SCN8A-202ENST00000355133 STK24Q9Y6E0 443 aa14.71□□□□□ -0.05
SCN8A-202ENST00000355133 EBAG9O00559 213 aa14.71□□□□□ -0.06
SCN8A-202ENST00000355133 ALDH1B1P30837 517 aa14.71□□□□□ -0.06
SCN8A-202ENST00000355133 TPD52P55327 224 aaPredicted RBP14.71□□□□□ -0.06
SCN8A-202ENST00000355133 HDXQ7Z353 690 aa14.71□□□□□ -0.06
SCN8A-202ENST00000355133 TPH2Q8IWU9 490 aa14.71□□□□□ -0.06
SCN8A-202ENST00000355133 COL17A1Q9UMD9 1497 aaPredicted RBP14.71□□□□□ -0.06
SCN8A-202ENST00000355133 NEURL1BA8MQ27 555 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 PER1O15534 1290 aaPredicted RBP14.7□□□□□ -0.06
SCN8A-202ENST00000355133 CD19P15391 556 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 NLRP12P59046 1061 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 POSTNQ15063 836 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 CMTR1Q8N1G2 835 aaKnown RBP14.7□□□□□ -0.06
SCN8A-202ENST00000355133 SORBS3O60504 671 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 PDE6BP35913 854 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 DNM2P50570 870 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 CTSWP56202 376 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 CCT6BQ92526 530 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.7□□□□□ -0.06
SCN8A-202ENST00000355133 RPS8P62241 208 aaKnown RBP14.7□□□□□ -0.06
SCN8A-202ENST00000355133 MFSD14BQ5SR56 506 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 MLKLQ8NB16 471 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 CBX8Q9HC52 389 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 PPANQ9NQ55 473 aaKnown RBP14.7□□□□□ -0.06
SCN8A-202ENST00000355133 DCUN1D2Q6PH85 259 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 RDH13Q8NBN7 331 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
SCN8A-202ENST00000355133 NACA2Q9H009 215 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 VIMP08670 466 aaKnown RBP14.7□□□□□ -0.06
SCN8A-202ENST00000355133 SLC9C1Q4G0N8 1177 aa14.7□□□□□ -0.06
SCN8A-202ENST00000355133 TBC1D22AQ8WUA7 517 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 SLAIN2Q9P270 581 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 UTP11Q9Y3A2 253 aaKnown RBP14.69□□□□□ -0.06
SCN8A-202ENST00000355133 SMCO2A6NFE2 343 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 KCNQ3O43525 872 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 GADD45BO75293 160 aaPredicted RBP14.69□□□□□ -0.06
SCN8A-202ENST00000355133 TCIRG1Q13488 830 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 TRMT44Q8IYL2 757 aaKnown RBP14.69□□□□□ -0.06
SCN8A-202ENST00000355133 REXO1Q8N1G1 1221 aaKnown RBP14.69□□□□□ -0.06
SCN8A-202ENST00000355133 PSMB7Q99436 277 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 PPARDQ03181 441 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 LRMPQ12912 555 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 CLUL1Q15846 466 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 CEP57Q86XR8 500 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
SCN8A-202ENST00000355133 PAGR1Q9BTK6 254 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 NFE2L3Q9Y4A8 694 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 NUP58Q9BVL2 599 aa14.69□□□□□ -0.06
SCN8A-202ENST00000355133 FRMPD2Q68DX3 1309 aaPredicted RBP14.69□□□□□ -0.06
SCN8A-202ENST00000355133 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms