RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 AOC2O75106 756 aa16.6■□□□□ 0.25
SEC13-202ENST00000350697 ASNSP08243 561 aa16.6■□□□□ 0.25
SEC13-202ENST00000350697 PTPRAP18433 802 aa16.6■□□□□ 0.25
SEC13-202ENST00000350697 MAP2K2P36507 400 aa16.6■□□□□ 0.25
SEC13-202ENST00000350697 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
SEC13-202ENST00000350697 OTUD5Q96G74 571 aa16.6■□□□□ 0.25
SEC13-202ENST00000350697 ZNF287Q9HBT7 754 aa16.6■□□□□ 0.25
SEC13-202ENST00000350697 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 GDF11O95390 407 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 GJA5P36382 358 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
SEC13-202ENST00000350697 PPIL2Q13356 520 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 ABCB5Q2M3G0 1257 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 ANAPC4Q9UJX5 808 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
SEC13-202ENST00000350697 GH2P01242 217 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 JAG1P78504 1218 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.24
SEC13-202ENST00000350697 PDE4BQ07343 736 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 KIAA1211Q6ZU35 1233 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 ZIC5Q96T25 663 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 TBC1D2Q9BYX2 928 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 MKNK2Q9HBH9 465 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 CABP5Q9NP86 173 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 ZHX2Q9Y6X8 837 aa16.58■□□□□ 0.24
SEC13-202ENST00000350697 MANSC4A6NHS7 340 aaPredicted RBP16.57■□□□□ 0.24
SEC13-202ENST00000350697 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
SEC13-202ENST00000350697 IRF6O14896 467 aa16.57■□□□□ 0.24
SEC13-202ENST00000350697 PTH1RQ03431 593 aa16.57■□□□□ 0.24
SEC13-202ENST00000350697 CTDSPL2Q05D32 466 aa16.57■□□□□ 0.24
SEC13-202ENST00000350697 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
SEC13-202ENST00000350697 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.57■□□□□ 0.24
SEC13-202ENST00000350697 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
SEC13-202ENST00000350697 ZNF213O14771 459 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 RASA1P20936 1047 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 GTF2A2P52657 109 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 IMMTQ16891 758 aaKnown RBP16.56■□□□□ 0.24
SEC13-202ENST00000350697 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
SEC13-202ENST00000350697 JMYQ8N9B5 988 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 AFG3L2Q9Y4W6 797 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
SEC13-202ENST00000350697 PHIPQ8WWQ0 1821 aa16.56■□□□□ 0.24
SEC13-202ENST00000350697 CXCL11O14625 94 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 AKR1B1P15121 316 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 INHBEP58166 350 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 HAND2P61296 217 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 SREBF2Q12772 1141 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 SNAPC2Q13487 334 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
SEC13-202ENST00000350697 ZNF444Q8N0Y2 327 aaPredicted RBP16.55■□□□□ 0.24
SEC13-202ENST00000350697 MAP4K1Q92918 833 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEC13-202ENST00000350697 LAMA4Q16363 1823 aa16.55■□□□□ 0.24
SEC13-202ENST00000350697 PRDM1O75626 825 aa16.54■□□□□ 0.24
SEC13-202ENST00000350697 FGRP09769 529 aa16.54■□□□□ 0.24
SEC13-202ENST00000350697 PCP11498 1178 aaKnown RBP16.54■□□□□ 0.24
SEC13-202ENST00000350697 RAB3GAP1Q15042 981 aa16.54■□□□□ 0.24
SEC13-202ENST00000350697 ZNF280CQ8ND82 737 aa16.54■□□□□ 0.24
SEC13-202ENST00000350697 MS4A4AQ96JQ5 239 aa16.54■□□□□ 0.24
SEC13-202ENST00000350697 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
SEC13-202ENST00000350697 LSG1Q9H089 658 aaKnown RBP16.54■□□□□ 0.24
SEC13-202ENST00000350697 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
SEC13-202ENST00000350697 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
SEC13-202ENST00000350697 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 ORC4O43929 436 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 CETPP11597 493 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 TM4SF4P48230 202 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
SEC13-202ENST00000350697 SPP2Q13103 211 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 SEPT2Q15019 361 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 AKNAD1Q5T1N1 836 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 NBPF3Q9H094 633 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 CCL15-CCL14A0A0B4J2E2 113 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 TESPA1A2RU30 521 aaPredicted RBP16.53■□□□□ 0.24
SEC13-202ENST00000350697 CCL15Q16663 113 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 TBC1D10CQ8IV04 446 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 STAG1Q8WVM7 1258 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 INCENPQ9NQS7 918 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 TOMM22Q9NS69 142 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
SEC13-202ENST00000350697 TACC3Q9Y6A5 838 aa16.53■□□□□ 0.24
SEC13-202ENST00000350697 PTPRFP10586 1907 aa16.52■□□□□ 0.24
SEC13-202ENST00000350697 A0A0G2JLL6 359 aaPredicted RBP16.52■□□□□ 0.23
SEC13-202ENST00000350697 PRRT2Q7Z6L0 340 aaPredicted RBP16.52■□□□□ 0.23
SEC13-202ENST00000350697 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.23
SEC13-202ENST00000350697 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.23
SEC13-202ENST00000350697 PCNTO95613 3336 aa16.51■□□□□ 0.23
SEC13-202ENST00000350697 PLIN4Q96Q06 1357 aa16.51■□□□□ 0.23
SEC13-202ENST00000350697 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
SEC13-202ENST00000350697 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
SEC13-202ENST00000350697 RANBP6O60518 1105 aaKnown RBP16.51■□□□□ 0.23
SEC13-202ENST00000350697 TSPY3P0CV98 308 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms