RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ZNF165P49910 485 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 ATP8B2P98198 1209 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 ARHGEF10O15013 1369 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAF3-201ENST00000347662 DHX58Q96C10 678 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 ANLNQ9NQW6 1124 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 CCDC87Q9NVE4 849 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 PDE1AP54750 535 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 KRT83P78385 493 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
TRAF3-201ENST00000347662 UTP14CQ5TAP6 766 aaKnown RBP13.11□□□□□ -0.31
TRAF3-201ENST00000347662 TAOK1Q7L7X3 1001 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
TRAF3-201ENST00000347662 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 STRN3Q13033 797 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 KRT19P08727 400 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-201ENST00000347662 BLVRAP53004 296 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 TESK2Q96S53 571 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
TRAF3-201ENST00000347662 CHMP2AO43633 222 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 VAMP4O75379 141 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
TRAF3-201ENST00000347662 NOP14P78316 857 aaKnown RBP13.1□□□□□ -0.31
TRAF3-201ENST00000347662 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 NUCKS1Q9H1E3 243 aaKnown RBP13.1□□□□□ -0.31
TRAF3-201ENST00000347662 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
TRAF3-201ENST00000347662 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 UTP11Q9Y3A2 253 aaKnown RBP13.1□□□□□ -0.31
TRAF3-201ENST00000347662 ZNF830Q96NB3 372 aaPredicted RBP13.1□□□□□ -0.31
TRAF3-201ENST00000347662 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 KCNQ4P56696 695 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 PPP2R5AQ15172 486 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 JADE1Q6IE81 842 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 CNNM2Q9H8M5 875 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 SCYL1Q96KG9 808 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 VAV2P52735 878 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 FNDC3AQ9Y2H6 1198 aaKnown RBP13.1□□□□□ -0.31
TRAF3-201ENST00000347662 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 HMG20BQ9P0W2 317 aa13.1□□□□□ -0.31
TRAF3-201ENST00000347662 EPB41P11171 864 aaKnown RBP13.09□□□□□ -0.31
TRAF3-201ENST00000347662 RAP1GDS1P52306 607 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-201ENST00000347662 Q6ZUG5 572 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 KRT79Q5XKE5 535 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 LZTFL1Q9NQ48 299 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 HHATQ5VTY9 493 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 CEP128Q6ZU80 1094 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 FAM170AA1A519 330 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 NUCB1Q02818 461 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 LIN9Q5TKA1 542 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRAF3-201ENST00000347662 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-201ENST00000347662 SAT1P21673 171 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-201ENST00000347662 PARP10Q53GL7 1025 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 CCDC94Q9BW85 323 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-201ENST00000347662 ZC4H2Q9NQZ6 224 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 TNNC1P63316 161 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
TRAF3-201ENST00000347662 RXRBP28702 533 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 PDCD2Q16342 344 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-201ENST00000347662 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 NUP160Q12769 1436 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 YEATS2Q9ULM3 1422 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 OPHN1O60890 802 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TSGA10Q9BZW7 698 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TMEM94Q12767 1356 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 PDE8AO60658 829 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 MBD4O95243 580 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 SMTNP53814 917 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 FAM47CQ5HY64 1035 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 NIM1KQ8IY84 436 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TNFAIP3P21580 790 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 VPS41P49754 854 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TBCCQ15814 346 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TSNAXIP1Q2TAA8 658 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 ABCF3Q9NUQ8 709 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 SSFA2P28290 1259 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 CLNS1AP54105 237 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms