RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 VPS16Q9H269 839 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 VWDEQ8N2E2 1590 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 DEPDC5O75140 1603 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 FGAP02671 866 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 NCBP1Q09161 790 aaKnown RBP16.62■□□□□ 0.25
NUP50-201ENST00000347635 GPR108Q9NPR9 543 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 PPP1R12BO60237 982 aaPredicted RBP16.62■□□□□ 0.25
NUP50-201ENST00000347635 ZFYVE27Q5T4F4 411 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 RNF187Q5TA31 235 aaPredicted RBP16.62■□□□□ 0.25
NUP50-201ENST00000347635 CCDC42Q96M95 316 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 LRRC24Q50LG9 513 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 TMTC1Q8IUR5 882 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 FANCLQ9NW38 375 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 IKBKBO14920 756 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 GIGYF2Q6Y7W6 1299 aaKnown RBP16.61■□□□□ 0.25
NUP50-201ENST00000347635 MAATS1Q7Z4T9 603 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 FCHSD1Q86WN1 690 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 NOSTRINQ8IVI9 506 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 NRKQ7Z2Y5 1582 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 ERVV-1B6SEH8 477 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 RASSF4Q9H2L5 321 aa16.61■□□□□ 0.25
NUP50-201ENST00000347635 TBC1D22AQ8WUA7 517 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 PTPRUQ92729 1446 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 GOLGA6L7A0A1B0GV03 622 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
NUP50-201ENST00000347635 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
NUP50-201ENST00000347635 TNNI2P48788 182 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 SMC1AQ14683 1233 aaKnown RBP16.6■□□□□ 0.25
NUP50-201ENST00000347635 SLC39A14Q15043 492 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 TMEM132AQ24JP5 1023 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 VAT1LQ9HCJ6 419 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 M0R2C6 588 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 RPS8P62241 208 aaKnown RBP16.6■□□□□ 0.25
NUP50-201ENST00000347635 PAK1Q13153 545 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 IFFO1Q0D2I5 559 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 C10orf67Q8IYJ2 551 aa16.6■□□□□ 0.25
NUP50-201ENST00000347635 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
NUP50-201ENST00000347635 TAX1BP1Q86VP1 789 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 TSGA10Q9BZW7 698 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 STX8Q9UNK0 236 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 PTPN12Q05209 780 aaKnown RBP16.59■□□□□ 0.25
NUP50-201ENST00000347635 CLIC6Q96NY7 704 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 JCADQ9P266 1359 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 PPP6R2O75170 966 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 BRD3Q15059 726 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
NUP50-201ENST00000347635 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
NUP50-201ENST00000347635 PXDNLA1KZ92 1463 aa16.59■□□□□ 0.25
NUP50-201ENST00000347635 RIMS1Q86UR5 1692 aaKnown RBP16.59■□□□□ 0.25
NUP50-201ENST00000347635 NF2P35240 595 aa16.58■□□□□ 0.25
NUP50-201ENST00000347635 TTC38Q5R3I4 469 aa16.58■□□□□ 0.25
NUP50-201ENST00000347635 TMC4Q7Z404 712 aa16.58■□□□□ 0.25
NUP50-201ENST00000347635 DESI2Q9BSY9 194 aa16.58■□□□□ 0.25
NUP50-201ENST00000347635 KCNF1Q9H3M0 494 aa16.58■□□□□ 0.25
NUP50-201ENST00000347635 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.25
NUP50-201ENST00000347635 USP42Q9H9J4 1324 aaKnown RBP16.58■□□□□ 0.25
NUP50-201ENST00000347635 PPLO60437 1756 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 TTLL7Q6ZT98 887 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 FERMT2Q96AC1 680 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 MMRN2Q9H8L6 949 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 TMCO5BA8MYB1 307 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 CIAO1O76071 339 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 ARID5BQ14865 1188 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 SPATA5Q8NB90 893 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 MPHOSPH6Q99547 160 aaKnown RBP16.58■□□□□ 0.24
NUP50-201ENST00000347635 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.24
NUP50-201ENST00000347635 PIK3AP1Q6ZUJ8 805 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 FAM76AQ8TAV0 307 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 AFAP1L1Q8TED9 768 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 CCDC51Q96ER9 411 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 WWC3Q9ULE0 1092 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 STX10O60499 249 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 NOP2P46087 812 aaKnown RBP16.57■□□□□ 0.24
NUP50-201ENST00000347635 NAPAP54920 295 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 AKNAD1Q5T1N1 836 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
NUP50-201ENST00000347635 RIMBP2O15034 1052 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 KIF23Q02241 960 aaPredicted RBP16.57■□□□□ 0.24
NUP50-201ENST00000347635 CPS1P31327 1500 aa16.57■□□□□ 0.24
NUP50-201ENST00000347635 TAB2Q9NYJ8 693 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 PLCD1P51178 756 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 IFI16Q16666 785 aaKnown RBP16.56■□□□□ 0.24
NUP50-201ENST00000347635 GIMAP7Q8NHV1 300 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 PLIN2Q99541 437 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 GOPCQ9HD26 462 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms