RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ZBTB21Q9ULJ3 1066 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 MBD4O95243 580 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 MYCLP12524 364 aaPredicted RBP12.22□□□□□ -0.45
CLCN6-202ENST00000346436 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■□□ 18.1
CLCN6-202ENST00000346436 TAF5LO75529 589 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 ZNF202O95125 648 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 TDRD12Q587J7 1177 aaKnown RBP12.22□□□□□ -0.45
CLCN6-202ENST00000346436 CTDSPL2Q05D32 466 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 ABI1Q8IZP0 508 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.453e-9■■□□□ 12.1
CLCN6-202ENST00000346436 EXOC7Q9UPT5 735 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 USO1O60763 962 aaKnown RBP12.22□□□□□ -0.45
CLCN6-202ENST00000346436 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
CLCN6-202ENST00000346436 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 PLIN2Q99541 437 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 ARMT1Q9H993 441 aa12.22□□□□□ -0.45
CLCN6-202ENST00000346436 TCP10Q12799 353 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
CLCN6-202ENST00000346436 MLXIPQ9HAP2 919 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 LRFN2Q9ULH4 789 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 TSPOAP1O95153 1857 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 SASH1O94885 1247 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 MCM6Q14566 821 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 SLC27A3Q5K4L6 730 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 DDX12PQ92771 950 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 RNF181Q9P0P0 153 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 GSTTP1A0A1W2PQM5 241 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 H0YHG0 523 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 CYP21A2P08686 494 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 NPR1P16066 1061 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 BRAPQ7Z569 592 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 FMNL3Q8IVF7 1028 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 ALKQ9UM73 1620 aa12.21□□□□□ -0.45
CLCN6-202ENST00000346436 STAMBPO95630 424 aa12.21□□□□□ -0.46
CLCN6-202ENST00000346436 MED14O60244 1454 aa12.21□□□□□ -0.46
CLCN6-202ENST00000346436 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.21□□□□□ -0.46
CLCN6-202ENST00000346436 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.46
CLCN6-202ENST00000346436 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.46
CLCN6-202ENST00000346436 XPO4Q9C0E2 1151 aaKnown RBP12.21□□□□□ -0.46
CLCN6-202ENST00000346436 CPSF1Q10570 1443 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 FANCCQ00597 558 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 MCF2L2Q86YR7 1114 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 ANKRD35Q8N283 1001 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 LLPHQ9BRT6 129 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 PUS3Q9BZE2 481 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 IL25Q9H293 177 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 KCNJ14Q9UNX9 436 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 TERF1P54274 439 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 POLA2Q14181 598 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 HSPD1P10809 573 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 PNOCQ13519 176 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 GLG1Q92896 1179 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 XDHP47989 1333 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 SETD1BQ9UPS6 1966 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 YEATS4O95619 227 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 STAT6P42226 847 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 MYL5Q02045 173 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 ODR4Q5SWX8 454 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 HAUS3Q68CZ6 603 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 ZBTB33Q86T24 672 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 FCHSD1Q86WN1 690 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
CLCN6-202ENST00000346436 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
CLCN6-202ENST00000346436 PRDM1O75626 825 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 LEMD3Q9Y2U8 911 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 PSMD1Q99460 953 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 PODXL2Q9NZ53 605 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 CLIC4Q9Y696 253 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 ELP1O95163 1332 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
CLCN6-202ENST00000346436 ZNF174Q15697 407 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 ADCY9O60503 1353 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 POLR2DO15514 142 aaKnown RBP12.19□□□□□ -0.46
CLCN6-202ENST00000346436 MCM7P33993 719 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 ADD1P35611 737 aaKnown RBP12.19□□□□□ -0.46
CLCN6-202ENST00000346436 PDE4DQ08499 809 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 KRT40Q6A162 431 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 RETREG2Q8NC44 543 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 APPBP2Q92624 585 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 STAMQ92783 540 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 COA7Q96BR5 231 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 CRACR2AQ9BSW2 395 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLCN6-202ENST00000346436 KCNH3Q9ULD8 1083 aa12.19□□□□□ -0.46
CLCN6-202ENST00000346436 ADRA2BP18089 450 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 TMOD1P28289 359 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 CCDC24Q8N4L8 307 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 MASTLQ96GX5 879 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms