RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 KRT40Q6A162 431 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 ZC3H12CQ9C0D7 883 aaKnown RBP17.35■□□□□ 0.37
SRPK1-201ENST00000346162 KRT83P78385 493 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 SPATA5Q8NB90 893 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
SRPK1-201ENST00000346162 VWA3AA6NCI4 1184 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 GNPATO15228 680 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
SRPK1-201ENST00000346162 DTHD1Q6ZMT9 781 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 ZNF710Q8N1W2 664 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 ST7Q9NRC1 585 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 SAMD15Q9P1V8 674 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 SUFUQ9UMX1 484 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 RIPOR2Q9Y4F9 1068 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 ZNF202O95125 648 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 HIBADHP31937 336 aaKnown RBP17.34■□□□□ 0.37
SRPK1-201ENST00000346162 SLC8A1P32418 973 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 ZNF174Q15697 407 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 EHMT1Q9H9B1 1298 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 TLR7Q9NYK1 1049 aaKnown RBP17.34■□□□□ 0.37
SRPK1-201ENST00000346162 V9GY48 417 aaPredicted RBP17.34■□□□□ 0.37
SRPK1-201ENST00000346162 CROCC2H7BZ55 1655 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 AKR1B15C9JRZ8 316 aaPredicted RBP17.34■□□□□ 0.37
SRPK1-201ENST00000346162 CAPS2Q9BXY5 557 aa17.34■□□□□ 0.37
SRPK1-201ENST00000346162 TACC1O75410 805 aa17.33■□□□□ 0.37
SRPK1-201ENST00000346162 E2F5Q15329 346 aa17.33■□□□□ 0.37
SRPK1-201ENST00000346162 ANKRD7Q92527 254 aa17.33■□□□□ 0.37
SRPK1-201ENST00000346162 ZNF274Q96GC6 653 aaPredicted RBP17.33■□□□□ 0.37
SRPK1-201ENST00000346162 TRIM6Q9C030 488 aaPredicted RBP17.33■□□□□ 0.37
SRPK1-201ENST00000346162 MROH5Q6ZUA9 1318 aa17.33■□□□□ 0.37
SRPK1-201ENST00000346162 MADDQ8WXG6 1647 aa17.33■□□□□ 0.37
SRPK1-201ENST00000346162 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.36
SRPK1-201ENST00000346162 GNA11P29992 359 aa17.33■□□□□ 0.36
SRPK1-201ENST00000346162 CTDSPL2Q05D32 466 aa17.33■□□□□ 0.36
SRPK1-201ENST00000346162 CUL4AQ13619 759 aa17.33■□□□□ 0.36
SRPK1-201ENST00000346162 WHAMMP3Q1A5X7 153 aa17.33■□□□□ 0.36
SRPK1-201ENST00000346162 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.36
SRPK1-201ENST00000346162 FAM212AQ96EL1 285 aa17.33■□□□□ 0.36
SRPK1-201ENST00000346162 RRP36Q96EU6 259 aaKnown RBP17.33■□□□□ 0.36
SRPK1-201ENST00000346162 KIF5AQ12840 1032 aa17.33■□□□□ 0.36
SRPK1-201ENST00000346162 TACO1Q9BSH4 297 aaKnown RBP17.33■□□□□ 0.36
SRPK1-201ENST00000346162 PPARDQ03181 441 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
SRPK1-201ENST00000346162 TRMT1LQ7Z2T5 733 aaKnown RBP17.32■□□□□ 0.36
SRPK1-201ENST00000346162 SRLQ86TD4 932 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 SPHKAPQ2M3C7 1700 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 SNCBQ16143 134 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 TBC1D31Q96DN5 1066 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 TAOK3Q9H2K8 898 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 CUTAO60888 179 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 ERMNQ8TAM6 284 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 SMARCC2Q8TAQ2 1214 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 CDC42BPBQ9Y5S2 1711 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 MYO1BO43795 1136 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 CTSWP56202 376 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 ZKSCAN8Q15776 578 aaPredicted RBP17.32■□□□□ 0.36
SRPK1-201ENST00000346162 TTC6Q86TZ1 520 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 SELENOSQ9BQE4 189 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
SRPK1-201ENST00000346162 PPFIA4O75335 1185 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 ATP11AP98196 1134 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 CETN1Q12798 172 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 CNGA4Q8IV77 575 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 RPUSD2Q8IZ73 545 aaKnown RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 ZBTB38Q8NAP3 1195 aaPredicted RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 SUDS3Q9H7L9 328 aaPredicted RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 PFKFB2O60825 505 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 PCCAP05165 728 aaPredicted RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 TNNI2P48788 182 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 KRT79Q5XKE5 535 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 SPATS2Q86XZ4 545 aaKnown RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 ERBB3P21860 1342 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 E7EVH7 732 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 POLR2DO15514 142 aaKnown RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 GUCY2CP25092 1073 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 NOP2P46087 812 aaKnown RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 MYSM1Q5VVJ2 828 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 PPP1R13BQ96KQ4 1090 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 CCDC151A5D8V7 595 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 TBCAO75347 108 aaKnown RBP17.31■□□□□ 0.36
SRPK1-201ENST00000346162 RGS22Q8NE09 1264 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 SPAG5Q96R06 1193 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 USP28Q96RU2 1077 aa17.31■□□□□ 0.36
SRPK1-201ENST00000346162 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 CCDC122Q5T0U0 273 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 PLIN2Q99541 437 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 GLI2P10070 1586 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 AKNAD1Q5T1N1 836 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 STXBP4Q6ZWJ1 553 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 FGAP02671 866 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 YY1AP1Q9H869 796 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 TMEM94Q12767 1356 aa17.3■□□□□ 0.36
SRPK1-201ENST00000346162 GSTTP1A0A1W2PQM5 241 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 RNF168Q8IYW5 571 aaPredicted RBP17.29■□□□□ 0.36
SRPK1-201ENST00000346162 CCDC155Q8N6L0 562 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 TLDC2A0PJX2 215 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms