RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
TPM4-202ENST00000344824 CTU1Q7Z7A3 348 aaKnown RBP16.53■□□□□ 0.24
TPM4-202ENST00000344824 FOXP4Q8IVH2 680 aaPredicted RBP16.53■□□□□ 0.24
TPM4-202ENST00000344824 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
TPM4-202ENST00000344824 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
TPM4-202ENST00000344824 CFHR5Q9BXR6 569 aa16.53■□□□□ 0.24
TPM4-202ENST00000344824 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
TPM4-202ENST00000344824 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
TPM4-202ENST00000344824 SLC4A4Q9Y6R1 1079 aa16.53■□□□□ 0.24
TPM4-202ENST00000344824 PDHXO00330 501 aa16.52■□□□□ 0.23
TPM4-202ENST00000344824 CDC45O75419 566 aa16.52■□□□□ 0.23
TPM4-202ENST00000344824 SHROOM1Q2M3G4 852 aaPredicted RBP16.52■□□□□ 0.23
TPM4-202ENST00000344824 C8orf34Q49A92 452 aa16.52■□□□□ 0.23
TPM4-202ENST00000344824 AMOTL1Q8IY63 956 aa16.52■□□□□ 0.23
TPM4-202ENST00000344824 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.23
TPM4-202ENST00000344824 MGAMO43451 1857 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 USP17L5A8MUK1 530 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 CXCL11O14625 94 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
TPM4-202ENST00000344824 CYP2D6P10635 497 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 PLCD1P51178 756 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 EVX2Q03828 476 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
TPM4-202ENST00000344824 ANKRD23Q86SG2 305 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 CD99L2Q8TCZ2 262 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 ABHD8Q96I13 439 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 AS3MTQ9HBK9 375 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 AFG3L2Q9Y4W6 797 aa16.51■□□□□ 0.23
TPM4-202ENST00000344824 A0A0G2JLL6 359 aaPredicted RBP16.5■□□□□ 0.23
TPM4-202ENST00000344824 ASNSP08243 561 aa16.5■□□□□ 0.23
TPM4-202ENST00000344824 HMGCS2P54868 508 aa16.5■□□□□ 0.23
TPM4-202ENST00000344824 SPP2Q13103 211 aa16.5■□□□□ 0.23
TPM4-202ENST00000344824 PRRT2Q7Z6L0 340 aaPredicted RBP16.5■□□□□ 0.23
TPM4-202ENST00000344824 APPBP2Q92624 585 aa16.5■□□□□ 0.23
TPM4-202ENST00000344824 EHD4Q9H223 541 aa16.5■□□□□ 0.23
TPM4-202ENST00000344824 GH2P01242 217 aa16.49■□□□□ 0.23
TPM4-202ENST00000344824 ZFYP08048 801 aaPredicted RBP16.49■□□□□ 0.23
TPM4-202ENST00000344824 SP3Q02447 781 aa16.49■□□□□ 0.23
TPM4-202ENST00000344824 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
TPM4-202ENST00000344824 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
TPM4-202ENST00000344824 OSBP2Q969R2 916 aa16.49■□□□□ 0.23
TPM4-202ENST00000344824 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
TPM4-202ENST00000344824 ATP8A2Q9NTI2 1148 aa16.49■□□□□ 0.23
TPM4-202ENST00000344824 TRIM17Q9Y577 477 aa16.49■□□□□ 0.23
TPM4-202ENST00000344824 CYP2D7A0A087X1C5 515 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 CCDC85CA6NKD9 419 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 M0R2C6 588 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 MPHOSPH10O00566 681 aaKnown RBP16.48■□□□□ 0.23
TPM4-202ENST00000344824 GPAA1O43292 621 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 CYP2C8P10632 490 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 JAG1P78504 1218 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 MTMR2Q13614 643 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 MOGSQ13724 837 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 CERKLQ49MI3 558 aaPredicted RBP16.48■□□□□ 0.23
TPM4-202ENST00000344824 NOM1Q5C9Z4 860 aaKnown RBP16.48■□□□□ 0.23
TPM4-202ENST00000344824 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
TPM4-202ENST00000344824 FEZ1Q99689 392 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
TPM4-202ENST00000344824 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
TPM4-202ENST00000344824 TLR2O60603 784 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 CHMLP26374 656 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
TPM4-202ENST00000344824 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 GPAT2Q6NUI2 795 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 METTL16Q86W50 562 aaKnown RBP16.47■□□□□ 0.23
TPM4-202ENST00000344824 STK11IPQ8N1F8 1099 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 SLC44A5Q8NCS7 719 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 DYNLL2Q96FJ2 89 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 TBC1D2Q9BYX2 928 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 CABP5Q9NP86 173 aa16.47■□□□□ 0.23
TPM4-202ENST00000344824 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
TPM4-202ENST00000344824 APPP05067 770 aa16.46■□□□□ 0.23
TPM4-202ENST00000344824 SHMT1P34896 483 aa16.46■□□□□ 0.23
TPM4-202ENST00000344824 TDO2P48775 406 aa16.46■□□□□ 0.23
TPM4-202ENST00000344824 TREML2Q5T2D2 321 aa16.46■□□□□ 0.23
TPM4-202ENST00000344824 SMCR8Q8TEV9 937 aaPredicted RBP16.46■□□□□ 0.23
TPM4-202ENST00000344824 SEC62Q99442 399 aaKnown RBP16.46■□□□□ 0.23
TPM4-202ENST00000344824 BACH2Q9BYV9 841 aa16.46■□□□□ 0.23
TPM4-202ENST00000344824 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.23
TPM4-202ENST00000344824 USP17L12C9JPN9 530 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 USP17L21D6R901 530 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 KIF22Q14807 665 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 TATDN1Q6P1N9 297 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
TPM4-202ENST00000344824 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
TPM4-202ENST00000344824 STRBPQ96SI9 672 aaKnown RBP16.45■□□□□ 0.22
TPM4-202ENST00000344824 EFCC1Q9HA90 598 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 ARPP21Q9UBL0 812 aaPredicted RBP16.45■□□□□ 0.22
TPM4-202ENST00000344824 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
TPM4-202ENST00000344824 NMIQ13287 307 aaPredicted RBP16.45■□□□□ 0.22
TPM4-202ENST00000344824 CCDC129Q6ZRS4 1044 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 GINM1Q9NU53 330 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
TPM4-202ENST00000344824 MINDY4BA8MYZ0 360 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 USP17L10C9JJH3 530 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms