RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 KLF18A0A0U1RQI7 1052 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 B4E1Z4 1266 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 PLA2G6O60733 806 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 TOP1P11387 765 aaKnown RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 RASA1P20936 1047 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 CDK8P49336 464 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 METAP2P50579 478 aaKnown RBP eCLIP8.38□□□□□ -1.07
NUP43-201ENST00000340413 SCRN1Q12765 414 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 TRAF1Q13077 416 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 DIXDC1Q155Q3 683 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 MCTP2Q6DN12 878 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 ZNF444Q8N0Y2 327 aaPredicted RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 SERPINB13Q9UIV8 391 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 TNKSO95271 1327 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 PRPF3O43395 683 aaKnown RBP8.37□□□□□ -1.07
NUP43-201ENST00000340413 STX6O43752 255 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 GRIN3BO60391 1043 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 KDM4AO75164 1064 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 DLGAP5Q15398 846 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 PPP1R18Q6NYC8 613 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 BRAPQ7Z569 592 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 TGFBRAP1Q8WUH2 860 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
NUP43-201ENST00000340413 MYH4Q9Y623 1939 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 SNHG28P0DPA3 235 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 CXCL9Q07325 125 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 ORC2Q13416 577 aaPredicted RBP8.37□□□□□ -1.07
NUP43-201ENST00000340413 ZNF654Q8IZM8 581 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 PGAP2Q9UHJ9 254 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 GOLGA8BA8MQT2 603 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 DEXIO95424 95 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 GJB2P29033 226 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 IFIT1BQ5T764 474 aaKnown RBP8.37□□□□□ -1.07
NUP43-201ENST00000340413 SPZ1Q9BXG8 430 aa8.37□□□□□ -1.07
NUP43-201ENST00000340413 ZNF70Q9UC06 446 aaPredicted RBP8.37□□□□□ -1.07
NUP43-201ENST00000340413 NTRK3Q16288 839 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 RTN1Q16799 776 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 ASPRV1Q53RT3 343 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 TMEM179Q6ZVK1 233 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 ENAHQ8N8S7 591 aaPredicted RBP8.36□□□□□ -1.07
NUP43-201ENST00000340413 GMCL1P1Q8NEA9 526 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 DCAF4Q8WV16 495 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 FAM198AQ9UFP1 575 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 ISY1Q9ULR0 285 aaKnown RBP8.36□□□□□ -1.07
NUP43-201ENST00000340413 GOLGA8AA7E2F4 631 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 HAND2P61296 217 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 CCDC83Q8IWF9 413 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 MKNK2Q9HBH9 465 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 ZNF277Q9NRM2 450 aaPredicted RBP8.36□□□□□ -1.07
NUP43-201ENST00000340413 BRPF3Q9ULD4 1205 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 MINDY4BA8MYZ0 360 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 LARGE1O95461 756 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 F13A1P00488 732 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 TROAPQ12815 778 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 FANCBQ8NB91 859 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 DAGLBQ8NCG7 672 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 GLT8D2Q9H1C3 349 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 SH2D4AQ9H788 454 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 MTMR6Q9Y217 621 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 LOC285556D6RIA3 1793 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 RBBP6Q7Z6E9 1792 aaKnown RBP8.36□□□□□ -1.07
NUP43-201ENST00000340413 CNTNAP1P78357 1384 aa8.36□□□□□ -1.07
NUP43-201ENST00000340413 PTPDC1A2A3K4 754 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 XBP1P17861 261 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 OLFM4Q6UX06 510 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 SAMD3Q8N6K7 520 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 MYOZ2Q9NPC6 264 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 TSPY2A6NKD2 308 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 CTDNEP1O95476 244 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 TSPY3P0CV98 308 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 TSPY8P0CW00 308 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 SYT1P21579 422 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
NUP43-201ENST00000340413 TMTC3Q6ZXV5 915 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 MAPKAPK5Q8IW41 473 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
NUP43-201ENST00000340413 TNPO1Q92973 898 aaKnown RBP8.35□□□□□ -1.07
NUP43-201ENST00000340413 KAT14Q9H8E8 782 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 MCM4P33991 863 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 SHMT1P34896 483 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 GPATCH4Q5T3I0 446 aaKnown RBP8.35□□□□□ -1.07
NUP43-201ENST00000340413 NFXL1Q6ZNB6 911 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 NBPF11Q86T75 865 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 CTCFLQ8NI51 663 aaPredicted RBP8.35□□□□□ -1.07
NUP43-201ENST00000340413 KANSL2Q9H9L4 492 aa8.35□□□□□ -1.07
NUP43-201ENST00000340413 ESYT2A0FGR8 921 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 CPLX1O14810 134 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 TTLL1O95922 423 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 MBD3O95983 291 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 NOL9Q5SY16 702 aaKnown RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 FAM184AQ8NB25 1140 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 GMCL1Q96IK5 515 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 TFAP4Q01664 338 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms