RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 QPCTQ16769 361 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 WDR93Q6P2C0 686 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 NLRP14Q86W24 1093 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 RBM12BQ8IXT5 1001 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 TSEN2Q8NCE0 465 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 ZSCAN31Q96LW9 406 aaPredicted RBP10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 ALS2CR12Q96Q35 445 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 OSBPL1AQ9BXW6 950 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 BATF3Q9NR55 127 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 ANKIB1Q9P2G1 1089 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 DPPA5A6NC42 116 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ADD1P35611 737 aaKnown RBP10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 SCTRP47872 440 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ROR2Q01974 943 aaKnown RBP10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ANKRD20A8PQ5CZ79 823 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 MSL1Q68DK7 614 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 CUL5Q93034 780 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 SLX1AQ9BQ83 275 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ARHGEF10LQ9HCE6 1279 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 CORO1CQ9ULV4 474 aaPredicted RBP10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ATXN2Q99700 1313 aaKnown RBP10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 LRRC10BA6NIK2 292 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 H7C1W4 665 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ELF3P78545 371 aaPredicted RBP10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 C8orf76Q96K31 380 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 LRRC2Q9BYS8 371 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 PCMTD2Q9NV79 361 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 AATFQ9NY61 560 aaKnown RBP eCLIP10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 ADGRG1Q9Y653 693 aa10.85□□□□□ -0.67
PTCHD4-201ENST00000339488 PTPRTO14522 1441 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 HPDP32754 393 aaPredicted RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 POLE2P56282 527 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 MPP3Q13368 585 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 FMR1NBQ8N0W7 255 aaPredicted RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 SPICE1Q8N0Z3 855 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 HDAC7Q8WUI4 952 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 PRCCQ92733 491 aaPredicted RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 CCDC47Q96A33 483 aaKnown RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 OSBPL9Q96SU4 736 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 NAPGQ99747 312 aaPredicted RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 C2CD2Q9Y426 696 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 VWDEQ8N2E2 1590 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 NEDD4P46934 1319 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 hCG_2014768A0A024R1R8 64 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 B4DLN1 442 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 ATP5JP18859 108 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 CEBPAP49715 358 aaPredicted RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 C2orf54Q08AI8 447 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 MAP3K12Q12852 859 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 ELOA2Q8IYF1 753 aaPredicted RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 TRMT44Q8IYL2 757 aaKnown RBP10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 AGAP11Q8TF27 550 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 EPN3Q9H201 632 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 PCDHA7Q9UN72 937 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 PHF8Q9UPP1 1060 aa10.84□□□□□ -0.67
PTCHD4-201ENST00000339488 STX10O60499 249 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 MYBPC3Q14896 1274 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 PLCB4Q15147 1175 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 PTGISQ16647 500 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 INF2Q27J81 1249 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 TEKT4Q8WW24 435 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 CYFIP2Q96F07 1278 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 EBF2Q9HAK2 575 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 CFAP45Q9UL16 551 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 PDHA1P08559 390 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 NLRP12P59046 1061 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 SLC7A5Q01650 507 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 CCDC15Q0P6D6 951 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 NNTQ13423 1086 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 KCTD19Q17RG1 926 aaPredicted RBP10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 TSHZ1Q6ZSZ6 1077 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 CCDC50Q8IVM0 306 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 MRPS27Q92552 414 aaKnown RBP10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 RHBDL2Q9NX52 303 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 ZFATQ9P243 1243 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 MADDQ8WXG6 1647 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 ZNF185O15231 689 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 MXRA7P84157 204 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 PHC3Q8NDX5 983 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 RUFY1Q96T51 708 aa10.83□□□□□ -0.68
PTCHD4-201ENST00000339488 KIAA0232Q92628 1395 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 A8MUI8 341 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 MGRN1O60291 552 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 FERP16591 822 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 GCLCP48506 637 aaPredicted RBP10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 PIP4K2BP78356 416 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 NUGGCQ68CJ6 796 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 YTHDF3Q7Z739 585 aaKnown RBP10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 TBC1D1Q86TI0 1168 aaPredicted RBP10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 PANK4Q9NVE7 773 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 PES1O00541 588 aaKnown RBP10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 CBFA2T2O43439 604 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 EVI5O60447 810 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 PPP1R37O75864 691 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 NAT1P18440 290 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms