RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 DNAJC18Q9H819 358 aa14.14□□□□□ -0.15
SPTLC1-202ENST00000337841 MYH7P12883 1935 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 USP17L5A8MUK1 530 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 HAND2P61296 217 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 EVX2Q03828 476 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 PPATQ06203 517 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 GRM1Q13255 1194 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 CYP4F22Q6NT55 531 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 SLC44A5Q8NCS7 719 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 CAPNS2Q96L46 248 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 LSG1Q9H089 658 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 RBM8AQ9Y5S9 174 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 SNCAIPQ9Y6H5 919 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 ZHX2Q9Y6X8 837 aa14.13□□□□□ -0.15
SPTLC1-202ENST00000337841 SPDYE5A6NIY4 337 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 SMIM22K7EJ46 135 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 GDF11O95390 407 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 GH2P01242 217 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 PTPRAP18433 802 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 NT5C2P49902 561 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 AKNAD1Q5T1N1 836 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 RNF20Q5VTR2 975 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 SPRYD7Q5W111 196 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 OPTNQ96CV9 577 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 WNK4Q96J92 1243 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 AS3MTQ9HBK9 375 aa14.12□□□□□ -0.15
SPTLC1-202ENST00000337841 PAPPA2Q9BXP8 1791 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 ORC4O43929 436 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 PRDM1O75626 825 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 SLC10A3P09131 477 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 FGRP09769 529 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 ZBTB48P10074 688 aaPredicted RBP14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 RASA1P20936 1047 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 VEGFBP49765 207 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 NOGQ13253 232 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 PPIL2Q13356 520 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 RAB3GAP1Q15042 981 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 TMEM179Q6ZVK1 233 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 RASAL3Q86YV0 1011 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 OTUD5Q96G74 571 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 ZBTB21Q9ULJ3 1066 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 AK9Q5TCS8 1911 aa14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
SPTLC1-202ENST00000337841 ROBO3Q96MS0 1386 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 CXCL11O14625 94 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 RANBP6O60518 1105 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 TSPY3P0CV98 308 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 TSPY8P0CW00 308 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 AKR1B1P15121 316 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 MAP2K2P36507 400 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 GTF2A2P52657 109 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 INHBEP58166 350 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 TFAP4Q01664 338 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 TRDNQ13061 729 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 RRP12Q5JTH9 1297 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 STAG1Q8WVM7 1258 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 WDR18Q9BV38 432 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 KRT23Q9C075 422 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 CNNM2Q9H8M5 875 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 KANSL2Q9H9L4 492 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 INCENPQ9NQS7 918 aa14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.1□□□□□ -0.15
SPTLC1-202ENST00000337841 MANSC4A6NHS7 340 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 TSPY2A6NKD2 308 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 FAM155AB1AL88 458 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 CYP21A2P08686 494 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 ZKSCAN1P17029 563 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 JAG1P78504 1218 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 KIF23Q02241 960 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 SNAPC2Q13487 334 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 SEPT2Q15019 361 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 NECTIN1Q15223 517 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 ZNF280CQ8ND82 737 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 NEDD1Q8NHV4 660 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 ESR2Q92731 530 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 AFG3L2Q9Y4W6 797 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 TRPM7Q96QT4 1865 aa14.09□□□□□ -0.15
SPTLC1-202ENST00000337841 IRF6O14896 467 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 SLC27A2O14975 620 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 CETPP11597 493 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 MCCP23508 829 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 SPP2Q13103 211 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 CREB3L3Q68CJ9 461 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 TBC1D10CQ8IV04 446 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 DNAJC5GQ8N7S2 189 aa14.08□□□□□ -0.16
SPTLC1-202ENST00000337841 C19orf81C9J6K1 198 aa14.07□□□□□ -0.16
SPTLC1-202ENST00000337841 USP17L10C9JJH3 530 aa14.07□□□□□ -0.16
SPTLC1-202ENST00000337841 AOC2O75106 756 aa14.07□□□□□ -0.16
SPTLC1-202ENST00000337841 GUCY1A2P33402 732 aa14.07□□□□□ -0.16
SPTLC1-202ENST00000337841 GJA5P36382 358 aa14.07□□□□□ -0.16
SPTLC1-202ENST00000337841 SREBF2Q12772 1141 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms