RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 USH1CQ9Y6N9 552 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 UHRF1BP1Q6BDS2 1440 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 CALUO43852 315 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 GAS8O95995 478 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 ZNF853P0CG23 659 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 PFKFB1P16118 471 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 CTNNA1P35221 906 aaKnown RBP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 LIG3P49916 1009 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 LGSNQ5TDP6 509 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 LIN9Q5TKA1 542 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 PHLDB3Q6NSJ2 640 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 NFATC2IPQ8NCF5 419 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 TDRD7Q8NHU6 1098 aaKnown RBP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 MAIP1Q8WWC4 291 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 ZNF274Q96GC6 653 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 NIP7Q9Y221 180 aaKnown RBP eCLIP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 A0A1W2PP64 1363 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 BLMP54132 1417 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 LAMC3Q9Y6N6 1575 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 HGSO14964 777 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 KRT15P19012 456 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 CMA1P23946 247 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 GCKP35557 465 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 TTC6Q86TZ1 520 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 CCDC105Q8IYK2 499 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 USP28Q96RU2 1077 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 LRWD1Q9UFC0 647 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 DMRT2Q9Y5R5 561 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 SETSIPP0DME0 302 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 CHRNA2Q15822 529 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 HERC4Q5GLZ8 1057 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-202ENST00000337303 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 SETDB2Q96T68 719 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 DESI2Q9BSY9 194 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 NUF2Q9BZD4 464 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 KLHL14Q9P2G3 628 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 PYCARDQ9ULZ3 195 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 AGTPBP1Q9UPW5 1226 aa7.55□□□□□ -1.2
PBRM1-202ENST00000337303 GSPT1P15170 499 aaKnown RBP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 DNM2P50570 870 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 NONOQ15233 471 aaKnown RBP eCLIP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 NBPF14Q5TI25 921 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 FNBP1Q96RU3 617 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 METTL22Q9BUU2 404 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 CDC23Q9UJX2 597 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 FANCAO15360 1455 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 PLCH2O75038 1416 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 I3L4J1 428 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 LDHBP07195 334 aaKnown RBP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 KRT5P13647 590 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 CDC25BP30305 580 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 STX2P32856 288 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 RFC4P35249 363 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 BIRC3Q13489 604 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 PICALMQ13492 652 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 PNOCQ13519 176 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 RRAGAQ7L523 313 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 C2CD5Q86YS7 1000 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 CCDC170Q8IYT3 715 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 CEP120Q8N960 986 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 SERTAD1Q9UHV2 236 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 STK24Q9Y6E0 443 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 DUOX2Q9NRD8 1548 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 TROVE2P10155 538 aaKnown RBP eCLIP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 RFC1P35251 1148 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 TXKP42681 527 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 PKP1Q13835 747 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 TYW1BQ6NUM6 668 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 SRGAP1Q7Z6B7 1085 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 CADPS2Q86UW7 1296 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 PHKBQ93100 1093 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 TBC1D31Q96DN5 1066 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 GBP5Q96PP8 586 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 RAB3IPQ96QF0 476 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 ZSWIM6Q9HCJ5 1215 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 FAM207AQ9NSI2 230 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 BCAP29Q9UHQ4 241 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 GRIN2AQ12879 1464 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 RGS12O14924 1447 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 ATP5JP18859 108 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 ST5P78524 1137 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 PLS1Q14651 629 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 DZIP3Q86Y13 1208 aaKnown RBP7.54□□□□□ -1.2
PBRM1-202ENST00000337303 SNX29Q8TEQ0 813 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 ANKRD2Q9GZV1 360 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 PDE11AQ9HCR9 933 aa7.54□□□□□ -1.2
PBRM1-202ENST00000337303 B4DLN1 442 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 RNMTO43148 476 aaKnown RBP7.53□□□□□ -1.2
PBRM1-202ENST00000337303 IRX4P78413 519 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 MAP3K21Q5TCX8 1036 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 SEPT14Q6ZU15 432 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 ZNF354CQ86Y25 554 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 PLBD2Q8NHP8 589 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 FAM114A2Q9NRY5 505 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 AMFRQ9UKV5 643 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 RIPOR2Q9Y4F9 1068 aa7.53□□□□□ -1.2
PBRM1-202ENST00000337303 DENND4BO75064 1496 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms