RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 EHD4Q9H223 541 aa21.51■■□□□ 1.03
CMTM1-204ENST00000336328 NDUFB9Q9Y6M9 179 aa21.51■■□□□ 1.03
CMTM1-204ENST00000336328 MGAMO43451 1857 aa21.5■■□□□ 1.03
CMTM1-204ENST00000336328 CDK5RAP2Q96SN8 1893 aa21.5■■□□□ 1.03
CMTM1-204ENST00000336328 HOXA7P31268 230 aaPredicted RBP21.5■■□□□ 1.03
CMTM1-204ENST00000336328 IRX3P78415 501 aaPredicted RBP21.5■■□□□ 1.03
CMTM1-204ENST00000336328 PRKCZQ05513 592 aa21.5■■□□□ 1.03
CMTM1-204ENST00000336328 PXYLP1Q8TE99 480 aa21.5■■□□□ 1.03
CMTM1-204ENST00000336328 DNAJC2Q99543 621 aaKnown RBP21.5■■□□□ 1.03
CMTM1-204ENST00000336328 MYH1P12882 1939 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 GOLIM4O00461 696 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 MYCP01106 439 aaPredicted RBP21.49■■□□□ 1.03
CMTM1-204ENST00000336328 POLR3DP05423 398 aaPredicted RBP21.49■■□□□ 1.03
CMTM1-204ENST00000336328 ATP5JP18859 108 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 IRF5Q13568 498 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 TATDN1Q6P1N9 297 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 GCC1Q96CN9 775 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 RIOK1Q9BRS2 568 aaKnown RBP21.49■■□□□ 1.03
CMTM1-204ENST00000336328 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.49■■□□□ 1.03
CMTM1-204ENST00000336328 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 ASCC2Q9H1I8 757 aaPredicted RBP21.49■■□□□ 1.03
CMTM1-204ENST00000336328 DNAJC18Q9H819 358 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 CABP5Q9NP86 173 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 ZBTB21Q9ULJ3 1066 aa21.49■■□□□ 1.03
CMTM1-204ENST00000336328 ADCY3O60266 1144 aa21.48■■□□□ 1.03
CMTM1-204ENST00000336328 PDE6AP16499 860 aa21.48■■□□□ 1.03
CMTM1-204ENST00000336328 FLT3LGP49771 235 aa21.48■■□□□ 1.03
CMTM1-204ENST00000336328 MTMR2Q13614 643 aa21.48■■□□□ 1.03
CMTM1-204ENST00000336328 LRRCC1Q9C099 1032 aa21.48■■□□□ 1.03
CMTM1-204ENST00000336328 TAOK2Q9UL54 1235 aa21.48■■□□□ 1.03
CMTM1-204ENST00000336328 ZSWIM8A7E2V4 1837 aa21.48■■□□□ 1.03
CMTM1-204ENST00000336328 GDF11O95390 407 aa21.47■■□□□ 1.03
CMTM1-204ENST00000336328 GJB1P08034 283 aa21.47■■□□□ 1.03
CMTM1-204ENST00000336328 CERKLQ49MI3 558 aaPredicted RBP21.47■■□□□ 1.03
CMTM1-204ENST00000336328 USP17L2Q6R6M4 530 aa21.47■■□□□ 1.03
CMTM1-204ENST00000336328 GTF3C2Q8WUA4 911 aaPredicted RBP21.47■■□□□ 1.03
CMTM1-204ENST00000336328 RNF208Q9H0X6 261 aa21.47■■□□□ 1.03
CMTM1-204ENST00000336328 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
CMTM1-204ENST00000336328 GABRQQ9UN88 632 aa21.47■■□□□ 1.03
CMTM1-204ENST00000336328 HTTP42858 3142 aa21.46■■□□□ 1.03
CMTM1-204ENST00000336328 GH2P01242 217 aa21.46■■□□□ 1.03
CMTM1-204ENST00000336328 USP14P54578 494 aa21.46■■□□□ 1.03
CMTM1-204ENST00000336328 MTFR1Q15390 333 aa21.46■■□□□ 1.03
CMTM1-204ENST00000336328 ZNF532Q9HCE3 1301 aa21.46■■□□□ 1.03
CMTM1-204ENST00000336328 CCL5P13501 91 aa21.45■■□□□ 1.02
CMTM1-204ENST00000336328 ABCB5Q2M3G0 1257 aa21.45■■□□□ 1.02
CMTM1-204ENST00000336328 ZSCAN25Q6NSZ9 544 aa21.45■■□□□ 1.02
CMTM1-204ENST00000336328 P2RX7Q99572 595 aaKnown RBP21.45■■□□□ 1.02
CMTM1-204ENST00000336328 BOLA2Q9H3K6 86 aa21.45■■□□□ 1.02
CMTM1-204ENST00000336328 MCM9Q9NXL9 1143 aa21.45■■□□□ 1.02
CMTM1-204ENST00000336328 MORF4L1Q9UBU8 362 aa21.45■■□□□ 1.02
CMTM1-204ENST00000336328 SIPA1L1O43166 1804 aa21.45■■□□□ 1.02
CMTM1-204ENST00000336328 LOC285556D6RIA3 1793 aa21.44■■□□□ 1.02
CMTM1-204ENST00000336328 GJA8P48165 433 aa21.44■■□□□ 1.02
CMTM1-204ENST00000336328 JAG1P78504 1218 aa21.44■■□□□ 1.02
CMTM1-204ENST00000336328 GPRC5AQ8NFJ5 357 aa21.44■■□□□ 1.02
CMTM1-204ENST00000336328 HAUS7Q99871 368 aa21.44■■□□□ 1.02
CMTM1-204ENST00000336328 DOCK3Q8IZD9 2030 aa21.44■■□□□ 1.02
CMTM1-204ENST00000336328 RAB3GAP1Q15042 981 aa21.43■■□□□ 1.02
CMTM1-204ENST00000336328 C20orf194Q5TEA3 1177 aa21.43■■□□□ 1.02
CMTM1-204ENST00000336328 CCAR1Q8IX12 1150 aaKnown RBP21.43■■□□□ 1.02
CMTM1-204ENST00000336328 AMOTL1Q8IY63 956 aa21.43■■□□□ 1.02
CMTM1-204ENST00000336328 DDRGK1Q96HY6 314 aa21.43■■□□□ 1.02
CMTM1-204ENST00000336328 FEZ1Q99689 392 aa21.43■■□□□ 1.02
CMTM1-204ENST00000336328 ATP8A2Q9NTI2 1148 aa21.43■■□□□ 1.02
CMTM1-204ENST00000336328 TCRBV5S4A2TA0A5A2 114 aa21.42■■□□□ 1.02
CMTM1-204ENST00000336328 SLC34A2O95436 690 aa21.42■■□□□ 1.02
CMTM1-204ENST00000336328 PLCD1P51178 756 aa21.42■■□□□ 1.02
CMTM1-204ENST00000336328 HERVK_113P62684 666 aa21.42■■□□□ 1.02
CMTM1-204ENST00000336328 EMILIN3Q9NT22 766 aa21.42■■□□□ 1.02
CMTM1-204ENST00000336328 CENPFP49454 3210 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L15C9J2P7 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L13C9JLJ4 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L11C9JVI0 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L18D6R9N7 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L22D6RA61 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L17D6RBQ6 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L19D6RCP7 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L20D6RJB6 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 ADD2P35612 726 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 USP17L24Q0WX57 530 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 GPATCH3Q96I76 525 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 C12orf42Q96LP6 360 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 KIAA1683Q9H0B3 1180 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 DCP1AQ9NPI6 582 aaPredicted RBP21.41■■□□□ 1.02
CMTM1-204ENST00000336328 SWAP70Q9UH65 585 aa21.41■■□□□ 1.02
CMTM1-204ENST00000336328 SGPL1O95470 568 aa21.4■■□□□ 1.02
CMTM1-204ENST00000336328 MAPK4P31152 587 aa21.4■■□□□ 1.02
CMTM1-204ENST00000336328 GABPAQ06546 454 aa21.4■■□□□ 1.02
CMTM1-204ENST00000336328 UBE3CQ15386 1083 aa21.4■■□□□ 1.02
CMTM1-204ENST00000336328 DCTPP1Q9H773 170 aa21.4■■□□□ 1.02
CMTM1-204ENST00000336328 INHAP05111 366 aa21.39■■□□□ 1.01
CMTM1-204ENST00000336328 ELNP15502 786 aa21.39■■□□□ 1.01
CMTM1-204ENST00000336328 SHMT1P34896 483 aa21.39■■□□□ 1.01
CMTM1-204ENST00000336328 LCORLQ8N3X6 602 aa21.39■■□□□ 1.01
CMTM1-204ENST00000336328 U2AF1L4Q8WU68 220 aaKnown RBP21.39■■□□□ 1.01
CMTM1-204ENST00000336328 EDC3Q96F86 508 aaKnown RBP21.39■■□□□ 1.01
CMTM1-204ENST00000336328 HTATIP2Q9BUP3 242 aa21.39■■□□□ 1.01
CMTM1-204ENST00000336328 ECHDC1Q9NTX5 307 aa21.39■■□□□ 1.01
CMTM1-204ENST00000336328 GJD2Q9UKL4 321 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms