RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 TOB1P50616 345 aaPredicted RBP22.77■■□□□ 1.24
CDCA4-201ENST00000336219 CC2D1AQ6P1N0 951 aaPredicted RBP22.77■■□□□ 1.24
CDCA4-201ENST00000336219 ELOA2Q8IYF1 753 aaPredicted RBP22.77■■□□□ 1.24
CDCA4-201ENST00000336219 STAG1Q8WVM7 1258 aa22.77■■□□□ 1.24
CDCA4-201ENST00000336219 ZSWIM4Q9H7M6 989 aa22.77■■□□□ 1.24
CDCA4-201ENST00000336219 NFE2L3Q9Y4A8 694 aa22.77■■□□□ 1.24
CDCA4-201ENST00000336219 A0A0U1RQJ8 604 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 MYO1BO43795 1136 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 MAP3K9P80192 1104 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 MDM2Q00987 491 aaPredicted RBP22.76■■□□□ 1.23
CDCA4-201ENST00000336219 DIS3L2Q8IYB7 885 aaKnown RBP22.76■■□□□ 1.23
CDCA4-201ENST00000336219 ATRIPQ8WXE1 791 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 CALCOCO1Q9P1Z2 691 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 CDK11BP21127 795 aaKnown RBP22.76■■□□□ 1.23
CDCA4-201ENST00000336219 OAS2P29728 719 aaKnown RBP22.76■■□□□ 1.23
CDCA4-201ENST00000336219 GYS2P54840 703 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 SAFBQ15424 915 aaKnown RBP eCLIP22.76■■□□□ 1.23
CDCA4-201ENST00000336219 RTN1Q16799 776 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 LCORLQ8N3X6 602 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 KIFC2Q96AC6 838 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 DHX58Q96C10 678 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 MRFAP1Q9Y605 127 aa22.76■■□□□ 1.23
CDCA4-201ENST00000336219 PNPLA7Q6ZV29 1317 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 GNAT2P19087 354 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 RRP12Q5JTH9 1297 aaKnown RBP22.75■■□□□ 1.23
CDCA4-201ENST00000336219 FCHSD1Q86WN1 690 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 TRIM22Q8IYM9 498 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 SMARCE1Q969G3 411 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 MED15Q96RN5 788 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 ZKSCAN3Q9BRR0 538 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 SEC31BQ9NQW1 1179 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 SAMSN1Q9NSI8 373 aaKnown RBP22.75■■□□□ 1.23
CDCA4-201ENST00000336219 KCNJ14Q9UNX9 436 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 TDO2P48775 406 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 MPHOSPH8Q99549 860 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 SERTAD1Q9UHV2 236 aa22.75■■□□□ 1.23
CDCA4-201ENST00000336219 WTAPQ15007 396 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 SART3Q15020 963 aaKnown RBP22.74■■□□□ 1.23
CDCA4-201ENST00000336219 BBXQ8WY36 941 aaPredicted RBP22.74■■□□□ 1.23
CDCA4-201ENST00000336219 PARD6BQ9BYG5 372 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 NACAP1Q9BZK3 213 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 FOXP1Q9H334 677 aaPredicted RBP22.74■■□□□ 1.23
CDCA4-201ENST00000336219 MRPL44Q9H9J2 332 aaKnown RBP22.74■■□□□ 1.23
CDCA4-201ENST00000336219 FBXO2Q9UK22 296 aaPredicted RBP22.74■■□□□ 1.23
CDCA4-201ENST00000336219 SLC4A4Q9Y6R1 1079 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 POLR2DO15514 142 aaKnown RBP22.74■■□□□ 1.23
CDCA4-201ENST00000336219 PTPREP23469 700 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 SUSD4Q5VX71 490 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 CCDC82Q8N4S0 544 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 TOMM22Q9NS69 142 aa22.74■■□□□ 1.23
CDCA4-201ENST00000336219 GTF2E1P29083 439 aaPredicted RBP22.73■■□□□ 1.23
CDCA4-201ENST00000336219 RILPL1Q5EBL4 403 aa22.73■■□□□ 1.23
CDCA4-201ENST00000336219 SPECC1LQ69YQ0 1117 aa22.73■■□□□ 1.23
CDCA4-201ENST00000336219 MYH6P13533 1939 aa22.73■■□□□ 1.23
CDCA4-201ENST00000336219 ATP2B1P20020 1258 aa22.73■■□□□ 1.23
CDCA4-201ENST00000336219 POSTNQ15063 836 aa22.73■■□□□ 1.23
CDCA4-201ENST00000336219 RSRC2Q7L4I2 434 aaKnown RBP22.73■■□□□ 1.23
CDCA4-201ENST00000336219 CMTR1Q8N1G2 835 aaKnown RBP22.73■■□□□ 1.23
CDCA4-201ENST00000336219 MTA3Q9BTC8 594 aa22.73■■□□□ 1.23
CDCA4-201ENST00000336219 UBXN6Q9BZV1 441 aa22.73■■□□□ 1.23
CDCA4-201ENST00000336219 HOOK1Q9UJC3 728 aaKnown RBP22.73■■□□□ 1.23
CDCA4-201ENST00000336219 PLCH1Q4KWH8 1693 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 DEXIO95424 95 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 SMC1AQ14683 1233 aaKnown RBP22.72■■□□□ 1.23
CDCA4-201ENST00000336219 CRACR2BQ8N4Y2 399 aaPredicted RBP22.72■■□□□ 1.23
CDCA4-201ENST00000336219 SOWAHDA6NJG2 315 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 ZNF18P17022 549 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 CAPN2P17655 700 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 BCAMP50895 628 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 FAM193AP78312 1265 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 USP49Q70CQ1 688 aa22.72■■□□□ 1.23
CDCA4-201ENST00000336219 ERICH2A1L162 156 aa22.71■■□□□ 1.23
CDCA4-201ENST00000336219 STX10O60499 249 aa22.71■■□□□ 1.23
CDCA4-201ENST00000336219 GPR161Q8N6U8 529 aaKnown RBP22.71■■□□□ 1.23
CDCA4-201ENST00000336219 CCDC12Q8WUD4 166 aaPredicted RBP22.71■■□□□ 1.23
CDCA4-201ENST00000336219 CCDC196A0A1B0GTZ2 297 aa22.71■■□□□ 1.23
CDCA4-201ENST00000336219 NT5DC1Q5TFE4 455 aa22.71■■□□□ 1.23
CDCA4-201ENST00000336219 CREBRFQ8IUR6 639 aa22.71■■□□□ 1.23
CDCA4-201ENST00000336219 TMTC2Q8N394 836 aa22.71■■□□□ 1.23
CDCA4-201ENST00000336219 LZTFL1Q9NQ48 299 aa22.71■■□□□ 1.23
CDCA4-201ENST00000336219 PHLPP1O60346 1717 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 TEX33O43247 280 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 TPM1P09493 284 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 RCAN1P53805 252 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 EIF5P55010 431 aaKnown RBP22.7■■□□□ 1.22
CDCA4-201ENST00000336219 NR5A1Q13285 461 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 MIGA1Q8NAN2 632 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 PCDHB6Q9Y5E3 794 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 ZNF579Q8NAF0 562 aaKnown RBP22.7■■□□□ 1.22
CDCA4-201ENST00000336219 FANCBQ8NB91 859 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 CPLX3Q8WVH0 158 aa22.7■■□□□ 1.22
CDCA4-201ENST00000336219 RNF41Q9H4P4 317 aaPredicted RBP22.7■■□□□ 1.22
CDCA4-201ENST00000336219 ZNF335Q9H4Z2 1342 aaPredicted RBP22.7■■□□□ 1.22
CDCA4-201ENST00000336219 SARSP49591 514 aaKnown RBP22.69■■□□□ 1.22
CDCA4-201ENST00000336219 ZNF654Q8IZM8 581 aa22.69■■□□□ 1.22
CDCA4-201ENST00000336219 RAI14Q9P0K7 980 aa22.69■■□□□ 1.22
CDCA4-201ENST00000336219 STRCQ7RTU9 1775 aa22.69■■□□□ 1.22
CDCA4-201ENST00000336219 DOT1LQ8TEK3 1739 aa22.69■■□□□ 1.22
CDCA4-201ENST00000336219 FUT8Q9BYC5 575 aa22.69■■□□□ 1.22
CDCA4-201ENST00000336219 ARFGAP3Q9NP61 516 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms