RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NXNQ6DKJ4 435 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 SPDL1Q96EA4 605 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 HAUS7Q99871 368 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 FAM170AA1A519 330 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 TAF11Q15544 211 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 KLHDC4Q8TBB5 520 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 P3H4Q92791 437 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 CCDC141Q6ZP82 1450 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 BIRC3Q13489 604 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 CASC4Q6P4E1 433 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 WAPLQ7Z5K2 1190 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 CCDC197Q8NCU1 140 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 PPP4R1Q8TF05 950 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 HINFPQ9BQA5 517 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 AFG3L2Q9Y4W6 797 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 POSTNQ15063 836 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 LETM2Q2VYF4 491 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 LRRC8AQ8IWT6 810 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 DPH5Q9H2P9 285 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 MYO1AQ9UBC5 1043 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 NESP48681 1621 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 KAT6BQ8WYB5 2073 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 STK10O94804 968 aaKnown RBP10.85□□□□□ -0.67
COL4A6-201ENST00000334504 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
COL4A6-201ENST00000334504 UHMK1Q8TAS1 419 aaKnown RBP10.85□□□□□ -0.67
COL4A6-201ENST00000334504 TRIM6Q9C030 488 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-201ENST00000334504 RNF8O76064 485 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-201ENST00000334504 RSPH3Q86UC2 560 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 PYCARDQ9ULZ3 195 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 HYOU1Q9Y4L1 999 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 ANKRD36BQ8N2N9 1353 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 APOEP02649 317 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 SCOCQ9UIL1 159 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 SNX14Q9Y5W7 946 aa10.85□□□□□ -0.67
COL4A6-201ENST00000334504 NAIPQ13075 1403 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 DNAJC8O75937 253 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-201ENST00000334504 GNA11P29992 359 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 CDC37L1Q7L3B6 337 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 TEX11Q8IYF3 940 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 SLC52A1Q9NWF4 448 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 POLKQ9UBT6 870 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 PNOCQ13519 176 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 BICC1Q9H694 974 aaKnown RBP10.84□□□□□ -0.67
COL4A6-201ENST00000334504 KRIT1O00522 736 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 SLC27A2O14975 620 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 RFC4P35249 363 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 MCTP2Q6DN12 878 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 RRAGAQ7L523 313 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 C8orf58Q8NAV2 365 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 PROCA1Q8NCQ7 364 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-201ENST00000334504 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A6-201ENST00000334504 KCNK3O14649 394 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 HMGB2P26583 209 aaKnown RBP10.84□□□□□ -0.67
COL4A6-201ENST00000334504 PIK3AP1Q6ZUJ8 805 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 PALM2Q8IXS6 379 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 DTNBO60941 627 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 OTUD7BQ6GQQ9 843 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 CCDC89Q8N998 374 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 TRIM58Q8NG06 486 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 FNBP1Q96RU3 617 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 KRT12Q99456 494 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 AMFRQ9UKV5 643 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 DISP3Q9P2K9 1392 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 TIAM1Q13009 1591 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 PICALMQ13492 652 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 MPHOSPH6Q99547 160 aaKnown RBP10.84□□□□□ -0.67
COL4A6-201ENST00000334504 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 NCOA5Q9HCD5 579 aaKnown RBP10.84□□□□□ -0.67
COL4A6-201ENST00000334504 ANLNQ9NQW6 1124 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 TRIM35Q9UPQ4 493 aa10.84□□□□□ -0.67
COL4A6-201ENST00000334504 FLOT1O75955 427 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 SUN1O94901 812 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 CTAGE3PQ8IX95 158 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 CCDC51Q96ER9 411 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 BUB1O43683 1085 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 GRM8O00222 908 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 DAPK3O43293 454 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 TRAF1Q13077 416 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 FAM133BQ5BKY9 247 aaKnown RBP10.83□□□□□ -0.68
COL4A6-201ENST00000334504 MAGEB6Q8N7X4 407 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 ATP2A3Q93084 1043 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 SNAPC4Q5SXM2 1469 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 C2CD5Q86YS7 1000 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 MIGA1Q8NAN2 632 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 FBXO41Q8TF61 875 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 TSC22D3Q99576 134 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 GNAT2P19087 354 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 CAPN12Q6ZSI9 719 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 MAIP1Q8WWC4 291 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 LLPHQ9BRT6 129 aaKnown RBP10.83□□□□□ -0.68
COL4A6-201ENST00000334504 BLZF1Q9H2G9 400 aa10.83□□□□□ -0.68
COL4A6-201ENST00000334504 FAM207AQ9NSI2 230 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-201ENST00000334504 CCNT1O60563 726 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms