RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ZBTB43O43298 467 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 SLC9C2Q5TAH2 1124 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 ZMYM6O95789 1325 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 UBE2Q2LH0YL09 131 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 ZNF18P17022 549 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 GRIN1Q05586 938 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 FILIP1LQ4L180 1135 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 BTBD18B2RXH4 712 aa15.58■□□□□ 0.09
SYNE3-201ENST00000334258 ZFYP08048 801 aaPredicted RBP15.58■□□□□ 0.09
SYNE3-201ENST00000334258 AFMP43652 599 aa15.58■□□□□ 0.09
SYNE3-201ENST00000334258 PANX2Q96RD6 677 aa15.58■□□□□ 0.09
SYNE3-201ENST00000334258 TEX13AQ9BXU3 409 aaPredicted RBP15.58■□□□□ 0.09
SYNE3-201ENST00000334258 B4E1Z4 1266 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 ADORA1P30542 326 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 FOXO4P98177 505 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 NR1I3Q14994 352 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 APPBP2Q92624 585 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.58■□□□□ 0.08
SYNE3-201ENST00000334258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.58■□□□□ 0.081e-7■■■□□ 18.9
SYNE3-201ENST00000334258 CPDO75976 1380 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 EIF3CLB5ME19 914 aaKnown RBP15.58■□□□□ 0.08
SYNE3-201ENST00000334258 ZAP70P43403 619 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 CTR9Q6PD62 1173 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 PI16Q6UXB8 463 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 ACRBPQ8NEB7 543 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 EIF3CQ99613 913 aaKnown RBP15.58■□□□□ 0.08
SYNE3-201ENST00000334258 FAM204AQ9H8W3 233 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 ATG3Q9NT62 314 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 TBC1D2BQ9UPU7 963 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
SYNE3-201ENST00000334258 EXOC5O00471 708 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 CASP14P31944 242 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 NOP2P46087 812 aaKnown RBP15.57■□□□□ 0.08
SYNE3-201ENST00000334258 APOA5Q6Q788 366 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 NAPGQ99747 312 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-201ENST00000334258 SENP2Q9HC62 589 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 GPR108Q9NPR9 543 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 CWC25Q9NXE8 425 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-201ENST00000334258 KCNJ14Q9UNX9 436 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 MRC1P22897 1456 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 FOXP2O15409 715 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 SSRP1Q08945 709 aaKnown RBP15.57■□□□□ 0.08
SYNE3-201ENST00000334258 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 PLBD2Q8NHP8 589 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 RAB21Q9UL25 225 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 AKAP2Q9Y2D5 859 aa15.57■□□□□ 0.08
SYNE3-201ENST00000334258 TULP1O00294 542 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-201ENST00000334258 MAGEA9P43362 315 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 TMEM67Q5HYA8 995 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 NOSTRINQ8IVI9 506 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 FAM71BQ8TC56 605 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 USP5P45974 858 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 MDM2Q00987 491 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-201ENST00000334258 CCDC57Q2TAC2 916 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 CYB5R4Q7L1T6 521 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 MSANTD4Q8NCY6 345 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 XAGE2Q96GT9 111 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 NAA15Q9BXJ9 866 aaKnown RBP15.56■□□□□ 0.08
SYNE3-201ENST00000334258 MKRN1Q9UHC7 482 aaKnown RBP15.56■□□□□ 0.08
SYNE3-201ENST00000334258 PHRF1Q9P1Y6 1649 aaKnown RBP15.56■□□□□ 0.08
SYNE3-201ENST00000334258 CCT6AP40227 531 aaKnown RBP15.56■□□□□ 0.08
SYNE3-201ENST00000334258 PLCD1P51178 756 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 MORC3Q14149 939 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 SCARF1Q14162 830 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 ICE2Q659A1 982 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 DIS3L2Q8IYB7 885 aaKnown RBP15.56■□□□□ 0.08
SYNE3-201ENST00000334258 FAM89AQ96GI7 184 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 GDAP1L1Q96MZ0 367 aa15.56■□□□□ 0.08
SYNE3-201ENST00000334258 A0A1B0GTH6 734 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 FAM237AA0A1B0GTK4 181 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 KCNQ2O43526 872 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 TUBB4BP68371 445 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 FAM98CQ17RN3 349 aaKnown RBP15.55■□□□□ 0.08
SYNE3-201ENST00000334258 NOA1Q8NC60 698 aaKnown RBP15.55■□□□□ 0.08
SYNE3-201ENST00000334258 MYCBPQ99417 103 aaPredicted RBP15.55■□□□□ 0.08
SYNE3-201ENST00000334258 SLC12A7Q9Y666 1083 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 COBLO75128 1261 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 IDH1O75874 414 aaKnown RBP15.55■□□□□ 0.08
SYNE3-201ENST00000334258 CASP7P55210 303 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 TUBB2AQ13885 445 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 NCAPH2Q6IBW4 605 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 CCDC148Q8NFR7 591 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 TUBB2BQ9BVA1 445 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 JRKLQ9Y4A0 524 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 MYH15Q9Y2K3 1946 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 USP49Q70CQ1 688 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 PTF1AQ7RTS3 328 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 SMYD4Q8IYR2 804 aaPredicted RBP15.55■□□□□ 0.08
SYNE3-201ENST00000334258 MED15Q96RN5 788 aa15.55■□□□□ 0.08
SYNE3-201ENST00000334258 NUP88Q99567 741 aaPredicted RBP15.55■□□□□ 0.08
SYNE3-201ENST00000334258 TTF2Q9UNY4 1162 aaKnown RBP15.55■□□□□ 0.08
SYNE3-201ENST00000334258 PLEKHG2Q9H7P9 1386 aa15.54■□□□□ 0.08
SYNE3-201ENST00000334258 OVOS2A0A0G2JMS6 1433 aa15.54■□□□□ 0.08
SYNE3-201ENST00000334258 H7C1W4 665 aa15.54■□□□□ 0.08
SYNE3-201ENST00000334258 ABL1P00519 1130 aa15.54■□□□□ 0.08
SYNE3-201ENST00000334258 LRP10Q7Z4F1 713 aa15.54■□□□□ 0.08
SYNE3-201ENST00000334258 TBC1D10CQ8IV04 446 aa15.54■□□□□ 0.08
SYNE3-201ENST00000334258 CNGA4Q8IV77 575 aa15.54■□□□□ 0.08
SYNE3-201ENST00000334258 DRC1Q96MC2 740 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms