RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 RILPL1Q5EBL4 403 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 ERMNQ8TAM6 284 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 LLPHQ9BRT6 129 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 KRT10P13645 584 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 TBC1D22AQ8WUA7 517 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 SPZ1Q9BXG8 430 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 EPHB4P54760 987 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 PLCB4Q15147 1175 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 C6orf118Q5T5N4 469 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 NXNQ6DKJ4 435 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 MICU3Q86XE3 530 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 LEO1Q8WVC0 666 aaPredicted RBP11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 IL1RL1Q01638 556 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 PSMD2Q13200 908 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 ADAM21Q9UKJ8 722 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 LONRF2Q1L5Z9 754 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 CALR3Q96L12 384 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 TMCC1O94876 653 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 ESRRBO95718 433 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 KRT5P13647 590 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 STOML1Q9UBI4 398 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 LONP1P36776 959 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 CASC4Q6P4E1 433 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 PPP4R1Q8TF05 950 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 TAF12Q16514 161 aa11.4□□□□□ -0.58
SPTBN1-201ENST00000333896 TRIM27P14373 513 aa11.4□□□□□ -0.59
SPTBN1-201ENST00000333896 GABPB2Q8TAK5 448 aaPredicted RBP11.4□□□□□ -0.59
SPTBN1-201ENST00000333896 C10orf88Q9H8K7 445 aa11.4□□□□□ -0.59
SPTBN1-201ENST00000333896 PSD3Q9NYI0 1048 aa11.4□□□□□ -0.59
SPTBN1-201ENST00000333896 STX2P32856 288 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 KRT9P35527 623 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 MAP3K12Q12852 859 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 CCDC117Q8IWD4 279 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 TUBA8Q9NY65 449 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 NLRP6P59044 892 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 SSH2Q76I76 1423 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 IQCA1LA6NCM1 817 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 HNRNPCL2B2RXH8 293 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 HNRNPCL1O60812 293 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 STK10O94804 968 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 MCF2L2Q86YR7 1114 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 CBX8Q9HC52 389 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 IFIT1P09914 478 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 TBC1D8O95759 1140 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 TMED10P49755 219 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 SFSWAPQ12872 951 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 CCDC93Q567U6 631 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 KAT14Q9H8E8 782 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 KLC4Q9NSK0 619 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 SPTLC3Q9NUV7 552 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 TSC22D4Q9Y3Q8 395 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 MYO18AQ92614 2054 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
SPTBN1-201ENST00000333896 RASGRF2O14827 1237 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 GNL1P36915 607 aaPredicted RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 LAMB3Q13751 1172 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 TMTC4Q5T4D3 741 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 TYW1Q9NV66 732 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 MAN1A1P33908 653 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 ORC6Q9Y5N6 252 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 EIF3BP55884 814 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 ASIC1P78348 528 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 MLKLQ8NB16 471 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 ANKRD2Q9GZV1 360 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 PARVBQ9HBI1 364 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 SLC8A3P57103 927 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 MOV10L1Q9BXT6 1211 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 BAG5Q9UL15 447 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 SYNRGQ9UMZ2 1314 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 CLCN6P51797 869 aa11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 DHX9Q08211 1270 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 UTP6Q9NYH9 597 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-201ENST00000333896 A0A1B0GW55 424 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DAPK3O43293 454 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DUX4L2P0CJ85 424 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DUX4L3P0CJ86 424 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DUX4L4P0CJ87 422 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DUX4L5P0CJ88 424 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DUX4L6P0CJ89 424 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DUX4L7P0CJ90 424 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 MRPS25P82663 173 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DCAF17Q5H9S7 520 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DUX4Q9UBX2 424 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 RNF123Q5XPI4 1314 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 MYH3P11055 1940 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 TATP17735 454 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 NCBP1Q09161 790 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 FNBP4Q8N3X1 1017 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 LRRIQ3A6PVS8 624 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 EEF1DP29692 281 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms