RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 DHX16O60231 1041 aaKnown RBP10.21□□□□□ -0.78
LSAMP-201ENST00000333617 SLC19A1P41440 591 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 TDO2P48775 406 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 NFIXQ14938 502 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 LCORLQ8N3X6 602 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 CNBD1Q8NA66 436 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 ZSCAN16Q9H4T2 348 aaPredicted RBP10.21□□□□□ -0.78
LSAMP-201ENST00000333617 EPB41L4AQ9HCS5 686 aaPredicted RBP10.21□□□□□ -0.78
LSAMP-201ENST00000333617 SLC4A4Q9Y6R1 1079 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 ANKRD31Q8N7Z5 1873 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 NRG2O14511 850 aaPredicted RBP10.2□□□□□ -0.78
LSAMP-201ENST00000333617 CYP7A1P22680 504 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 TM4SF1P30408 202 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 NASPP49321 788 aaPredicted RBP10.2□□□□□ -0.78
LSAMP-201ENST00000333617 RESTQ13127 1097 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 CCDC183Q5T5S1 534 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 NAA16Q6N069 864 aaPredicted RBP10.2□□□□□ -0.78
LSAMP-201ENST00000333617 KRT27Q7Z3Y8 459 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 FBXO33Q7Z6M2 555 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 TMEM87BQ96K49 555 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 CNNM2Q9H8M5 875 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 ANGEL1Q9UNK9 670 aaKnown RBP10.2□□□□□ -0.78
LSAMP-201ENST00000333617 ELP1O95163 1332 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 SALL1Q9NSC2 1324 aa10.2□□□□□ -0.78
LSAMP-201ENST00000333617 MAGEB6P1A0A0J9YX57 407 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 B4E1Z4 1266 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 SH2B2O14492 632 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-201ENST00000333617 PPEF1O14829 653 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-201ENST00000333617 PRKAB2O43741 272 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 HIBADHP31937 336 aaKnown RBP10.19□□□□□ -0.78
LSAMP-201ENST00000333617 CTDSPL2Q05D32 466 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 GRAPQ13588 217 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 GRIPAP1Q4V328 841 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 CYB5R4Q7L1T6 521 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 MIGA1Q8NAN2 632 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 GRAPLQ8TC17 118 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-201ENST00000333617 ANP32BQ92688 251 aaKnown RBP10.19□□□□□ -0.78
LSAMP-201ENST00000333617 SCAND2PQ9GZW5 306 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-201ENST00000333617 NAV1Q8NEY1 1877 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 NEDD4P46934 1319 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 PDS5AQ29RF7 1337 aaKnown RBP10.19□□□□□ -0.78
LSAMP-201ENST00000333617 MYH1P12882 1939 aa10.19□□□□□ -0.78
LSAMP-201ENST00000333617 CPLX1O14810 134 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 TRIM37O94972 964 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 GYS1P13807 737 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 HMGB2P26583 209 aaKnown RBP10.18□□□□□ -0.78
LSAMP-201ENST00000333617 KLRK1P26718 216 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 TPRNQ4KMQ1 711 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 AKNAD1Q5T1N1 836 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 FAM173BQ6P4H8 233 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 MFSD6Q6ZSS7 791 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 ADGRA1Q86SQ6 560 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 TTC6Q86TZ1 520 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 CCDC102AQ96A19 550 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 SPATA32Q96LK8 384 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 KRT23Q9C075 422 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 TFCP2L1Q9NZI6 479 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 MYH8P13535 1937 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 LRRC37AA6NMS7 1700 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 LETM1O95202 739 aaPredicted RBP10.18□□□□□ -0.78
LSAMP-201ENST00000333617 ST5P78524 1137 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 MDM2Q00987 491 aaPredicted RBP10.18□□□□□ -0.78
LSAMP-201ENST00000333617 PRR5LQ6MZQ0 368 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 STAG1Q8WVM7 1258 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 RBSNQ9H1K0 784 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 TSPY26PQ9H489 355 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 TFIP11Q9UBB9 837 aaKnown RBP10.18□□□□□ -0.78
LSAMP-201ENST00000333617 CFAP45Q9UL16 551 aa10.18□□□□□ -0.78
LSAMP-201ENST00000333617 BAZ2BQ9UIF8 2168 aaKnown RBP10.17□□□□□ -0.78
LSAMP-201ENST00000333617 DUOX1Q9NRD9 1551 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 FOCADQ5VW36 1801 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 FMNL1O95466 1100 aaPredicted RBP10.17□□□□□ -0.78
LSAMP-201ENST00000333617 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
LSAMP-201ENST00000333617 CD46P15529 392 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 TMEM67Q5HYA8 995 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 NFXL1Q6ZNB6 911 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 RAB11FIP4Q86YS3 637 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 IGDCC4Q8TDY8 1250 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 LEO1Q8WVC0 666 aaPredicted RBP10.17□□□□□ -0.78
LSAMP-201ENST00000333617 RPGRQ92834 1020 aaKnown RBP10.17□□□□□ -0.78
LSAMP-201ENST00000333617 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
LSAMP-201ENST00000333617 INCENPQ9NQS7 918 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 ZSWIM5Q9P217 1185 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 ANKIB1Q9P2G1 1089 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 SLC27A5Q9Y2P5 690 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 LEMD3Q9Y2U8 911 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 NRXN2Q9P2S2 1712 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 XDHP47989 1333 aa10.17□□□□□ -0.78
LSAMP-201ENST00000333617 GOLGA6L4A6NEF3 574 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 IFIT3O14879 490 aaKnown RBP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 ZBTB43O43298 467 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 KDM4AO75164 1064 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 CDKL5O76039 1030 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 SERPINB2P05120 415 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 LIFRP42702 1097 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 PPARAQ07869 468 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 SART3Q15020 963 aaKnown RBP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 RRP12Q5JTH9 1297 aaKnown RBP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 TMED8Q6PL24 325 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms