RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 KIF18AQ8NI77 898 aa11.52□□□□□ -0.56
RARB-201ENST00000330688 FAM84BQ96KN1 310 aaPredicted RBP11.52□□□□□ -0.56
RARB-201ENST00000330688 RNF26Q9BY78 433 aaPredicted RBP11.52□□□□□ -0.56
RARB-201ENST00000330688 GNL3LQ9NVN8 582 aaKnown RBP11.52□□□□□ -0.56
RARB-201ENST00000330688 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.56
RARB-201ENST00000330688 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.56
RARB-201ENST00000330688 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
RARB-201ENST00000330688 SARSP49591 514 aaKnown RBP11.52□□□□□ -0.57
RARB-201ENST00000330688 SMIM5Q71RC9 77 aa11.52□□□□□ -0.57
RARB-201ENST00000330688 PDILTQ8N807 584 aa11.52□□□□□ -0.57
RARB-201ENST00000330688 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
RARB-201ENST00000330688 ZSCAN10Q96SZ4 725 aaPredicted RBP11.52□□□□□ -0.57
RARB-201ENST00000330688 INTS13Q9NVM9 706 aa11.52□□□□□ -0.57
RARB-201ENST00000330688 VPS54Q9P1Q0 977 aa11.52□□□□□ -0.57
RARB-201ENST00000330688 ZNF652Q9Y2D9 606 aa11.52□□□□□ -0.57
RARB-201ENST00000330688 PHLPP1O60346 1717 aa11.52□□□□□ -0.57
RARB-201ENST00000330688 KCNJ6P48051 423 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 KCNQ4P56696 695 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 EVX2Q03828 476 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 FMR1Q06787 632 aaKnown RBP eCLIP11.51□□□□□ -0.57
RARB-201ENST00000330688 GOLGA8FQ08AF8 430 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 GOLGA8DPQ0D2H9 430 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 HSP90AA4PQ58FG1 418 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 CLEC4GQ6UXB4 293 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 CELF1Q92879 486 aaKnown RBP11.51□□□□□ -0.57
RARB-201ENST00000330688 CSRNP2Q9H175 543 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 CBFA2T2O43439 604 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 ZNF827Q17R98 1081 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 WNK3Q9BYP7 1800 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 ACTN4O43707 911 aaKnown RBP11.51□□□□□ -0.57
RARB-201ENST00000330688 PLEKHA8P1O95397 391 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 KLRK1P26718 216 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 CAVIN4Q5BKX8 364 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 CTR9Q6PD62 1173 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 BICDL1Q6ZP65 573 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 MED15Q96RN5 788 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 TMX1Q9H3N1 280 aa11.51□□□□□ -0.57
RARB-201ENST00000330688 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
RARB-201ENST00000330688 RREB1Q92766 1687 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 KIF2AO00139 706 aaPredicted RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 TROAPQ12815 778 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 MORC3Q14149 939 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 DHX8Q14562 1220 aaKnown RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 PPP2R5BQ15173 497 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 IFIT1BQ5T764 474 aaKnown RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 PHF20Q9BVI0 1012 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.5□□□□□ -0.57
RARB-201ENST00000330688 HOOK1Q9UJC3 728 aaKnown RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 V9GYY5 206 aaPredicted RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 ROBO1Q9Y6N7 1651 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 COL22A1Q8NFW1 1626 aaPredicted RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 CICQ96RK0 1608 aaPredicted RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 USP17L21D6R901 530 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 WNT7AO00755 349 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 FGRP09769 529 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
RARB-201ENST00000330688 SYT10Q6XYQ8 523 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 CEP131Q9UPN4 1083 aa11.5□□□□□ -0.57
RARB-201ENST00000330688 A0A087X0B3 334 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 PRPF3O43395 683 aaKnown RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 MYO1BO43795 1136 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 TOP1P11387 765 aaKnown RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 NOM1Q5C9Z4 860 aaKnown RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 FBXO33Q7Z6M2 555 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 SMARCC1Q92922 1105 aaPredicted RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 NFE2L3Q9Y4A8 694 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 A0A0U1RQG5 324 aaPredicted RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 NRDCO43847 1150 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 ZNF18P17022 549 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 SMAP1Q8IYB5 467 aaPredicted RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 TRMT44Q8IYL2 757 aaKnown RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 MLKLQ8NB16 471 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 SPATA20Q8TB22 786 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 ENOX1Q8TC92 643 aaKnown RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 EPSTI1Q96J88 318 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 PRDM10Q9NQV6 1147 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 NPY5RQ15761 445 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 TBC1D9BQ66K14 1250 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
RARB-201ENST00000330688 NSUN4Q96CB9 384 aaKnown RBP11.49□□□□□ -0.57
RARB-201ENST00000330688 AHDC1Q5TGY3 1603 aaPredicted RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 NMT2O60551 498 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 SLU7O95391 586 aaKnown RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 XBP1P17861 261 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 KRT2P35908 639 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 TMEM139Q8IV31 216 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 ERO1AQ96HE7 468 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 L2HGDHQ9H9P8 463 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms