RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 IL17RBQ9NRM6 502 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 ZNF219Q9P2Y4 722 aaPredicted RBP19.69■□□□□ 0.74
DDX41-201ENST00000330503 CLIC4Q9Y696 253 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 FLT1P17948 1338 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 TSPY2A6NKD2 308 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 TRIM22Q8IYM9 498 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 SLC44A5Q8NCS7 719 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 WASF1Q92558 559 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 CNKSR1Q969H4 720 aa19.69■□□□□ 0.74
DDX41-201ENST00000330503 F8W031 263 aaPredicted RBP19.68■□□□□ 0.74
DDX41-201ENST00000330503 DDAH1O94760 285 aa19.68■□□□□ 0.74
DDX41-201ENST00000330503 DACT1Q9NYF0 836 aa19.68■□□□□ 0.74
DDX41-201ENST00000330503 TAOK2Q9UL54 1235 aa19.68■□□□□ 0.74
DDX41-201ENST00000330503 DEXIO95424 95 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 CALM1P0DP23 149 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 CALM2P0DP24 149 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 CALM3P0DP25 149 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 U2AF2P26368 475 aaKnown RBP eCLIP19.67■□□□□ 0.742e-13■■□□□ 14.3
DDX41-201ENST00000330503 AMOTL1Q8IY63 956 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 LINC00301Q8NCQ3 95 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 ANKS1AQ92625 1134 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 FUCA2Q9BTY2 467 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 DBNDD1Q9H9R9 158 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 MKNK2Q9HBH9 465 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 TTF2Q9UNY4 1162 aaKnown RBP19.67■□□□□ 0.74
DDX41-201ENST00000330503 NR1I2O75469 434 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 PLEKHA8P1O95397 391 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 NT5C2P49902 561 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 TRIM29Q14134 588 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 PODNQ7Z5L7 613 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.67■□□□□ 0.74
DDX41-201ENST00000330503 POLR3EQ9NVU0 708 aa19.67■□□□□ 0.74
DDX41-201ENST00000330503 DDX60LQ5H9U9 1706 aaKnown RBP19.66■□□□□ 0.74
DDX41-201ENST00000330503 G3V3G9 751 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 RASA1P20936 1047 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 BAG6P46379 1132 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 PKN1Q16512 942 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 DCAF8Q5TAQ9 597 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 BICD2Q8TD16 824 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 RNF26Q9BY78 433 aaPredicted RBP19.66■□□□□ 0.74
DDX41-201ENST00000330503 RBM28Q9NW13 759 aaKnown RBP19.66■□□□□ 0.74
DDX41-201ENST00000330503 KLHL34Q8N239 644 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 SHISA4Q96DD7 197 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 TCP11L1Q9NUJ3 509 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 PCDHA7Q9UN72 937 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 KCNJ14Q9UNX9 436 aa19.66■□□□□ 0.74
DDX41-201ENST00000330503 USP17L3A6NCW0 530 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 USP17L4A6NCW7 530 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 PRPF3O43395 683 aaKnown RBP19.65■□□□□ 0.74
DDX41-201ENST00000330503 MMP1P03956 469 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 CDK8P49336 464 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 C16orf86Q6ZW13 317 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 TMTC3Q6ZXV5 915 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 USP17L1Q7RTZ2 530 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 DGKHQ86XP1 1220 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 CCAR1Q8IX12 1150 aaKnown RBP19.65■□□□□ 0.74
DDX41-201ENST00000330503 ZNF444Q8N0Y2 327 aaPredicted RBP19.65■□□□□ 0.74
DDX41-201ENST00000330503 GOLPH3LQ9H4A5 285 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 SNED1Q8TER0 1413 aa19.65■□□□□ 0.74
DDX41-201ENST00000330503 YEATS4O95619 227 aa19.64■□□□□ 0.74
DDX41-201ENST00000330503 SCNN1DP51172 638 aa19.64■□□□□ 0.74
DDX41-201ENST00000330503 SF3B2Q13435 895 aaKnown RBP19.64■□□□□ 0.74
DDX41-201ENST00000330503 CAMK4Q16566 473 aa19.64■□□□□ 0.74
DDX41-201ENST00000330503 ANO1Q5XXA6 986 aa19.64■□□□□ 0.74
DDX41-201ENST00000330503 NUP62CLQ9H1M0 184 aa19.64■□□□□ 0.74
DDX41-201ENST00000330503 CLSTN2Q9H4D0 955 aa19.64■□□□□ 0.74
DDX41-201ENST00000330503 DDX19AQ9NUU7 478 aaKnown RBP19.64■□□□□ 0.74
DDX41-201ENST00000330503 MYH1P12882 1939 aa19.64■□□□□ 0.73
DDX41-201ENST00000330503 FOCADQ5VW36 1801 aa19.64■□□□□ 0.73
DDX41-201ENST00000330503 SRBD1Q8N5C6 995 aaKnown RBP19.64■□□□□ 0.73
DDX41-201ENST00000330503 V9GY48 417 aaPredicted RBP19.64■□□□□ 0.73
DDX41-201ENST00000330503 BTBD18B2RXH4 712 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 WDHD1O75717 1129 aaPredicted RBP19.63■□□□□ 0.73
DDX41-201ENST00000330503 ME1P48163 572 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 STK38Q15208 465 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 HHIPL2Q6UWX4 724 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 RNF214Q8ND24 703 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 hCG_1642624A0A1W2PR95 340 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 SNW1Q13573 536 aaKnown RBP19.63■□□□□ 0.73
DDX41-201ENST00000330503 APOBEC3HQ6NTF7 200 aaKnown RBP19.63■□□□□ 0.73
DDX41-201ENST00000330503 ENGASEQ8NFI3 743 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 DDX4Q9NQI0 724 aaKnown RBP19.63■□□□□ 0.73
DDX41-201ENST00000330503 USP40Q9NVE5 1235 aa19.63■□□□□ 0.73
DDX41-201ENST00000330503 SPTLC2O15270 562 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 ECE2O60344 883 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 TSPY3P0CV98 308 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 TSPY8P0CW00 308 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 DACT2Q5SW24 774 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 ADALQ6DHV7 355 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 RBM43Q6ZSC3 357 aaKnown RBP19.62■□□□□ 0.73
DDX41-201ENST00000330503 KCNG4Q8TDN1 519 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 MAP3K14Q99558 947 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 MYH6P13533 1939 aa19.62■□□□□ 0.73
DDX41-201ENST00000330503 ADAMTSL1Q8N6G6 1762 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
DDX41-201ENST00000330503 SLC39A14Q15043 492 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 MAP3K11Q16584 847 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 CCDC178Q5BJE1 867 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 STRIP1Q5VSL9 837 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 CDC42EP5Q6NZY7 148 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms