RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-201ENST00000326956 GUCY1A2P33402 732 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 GYS2P54840 703 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 TUBB4BP68371 445 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 TUBB2AQ13885 445 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 MUM1L1Q5H9M0 696 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 LEKR1Q6ZMV7 388 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-201ENST00000326956 TUBB2BQ9BVA1 445 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 CABP5Q9NP86 173 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 NR5A1Q13285 461 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 SPATA1Q5VX52 437 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
SSBP3-201ENST00000326956 WWC3Q9ULE0 1092 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 PATL2C9JE40 543 aaKnown RBP16.61■□□□□ 0.25
SSBP3-201ENST00000326956 XBP1P17861 261 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 TDO2P48775 406 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 CNGA4Q8IV77 575 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 IFNL3Q8IZI9 196 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 ZKSCAN3Q9BRR0 538 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 CSRNP2Q9H175 543 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 VPS18Q9P253 973 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
SSBP3-201ENST00000326956 CSF1RP07333 972 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 HSP90B2PQ58FF3 399 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 AKNAD1Q5T1N1 836 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 NACAP1Q9BZK3 213 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 MBD4O95243 580 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 GPTP24298 496 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 MAP3K12Q12852 859 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 RAD9BQ6WBX8 426 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 TEX13AQ9BXU3 409 aaPredicted RBP16.6■□□□□ 0.25
SSBP3-201ENST00000326956 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
SSBP3-201ENST00000326956 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 ACTN4O43707 911 aaKnown RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 TRIM28Q13263 835 aaKnown RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 ALX1Q15699 326 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CMTR1Q8N1G2 835 aaKnown RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 PDE11AQ9HCR9 933 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 TTF2Q9UNY4 1162 aaKnown RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 RHOXF2BP0C7M4 288 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CAPN2P17655 700 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 TNNT3P45378 269 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 PHKA1P46020 1223 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CT47A1Q5JQC4 288 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 GOLGA5Q8TBA6 731 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 RHOXF2Q9BQY4 288 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 GREM2Q9H772 168 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CTAGE15A4D2H0 777 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CTAGE8P0CG41 777 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CASP14P31944 242 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 USP49Q70CQ1 688 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CTAGE6Q86UF2 777 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 CTAGE4Q8IX94 777 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 TMTC2Q8N394 836 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 MAGEB6Q8N7X4 407 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 ANKRD20A12PQ8NF67 263 aa16.59■□□□□ 0.25
SSBP3-201ENST00000326956 ZNF512BQ96KM6 892 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-201ENST00000326956 MFAP3LO75121 409 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 HNRNPLLQ8WVV9 542 aaKnown RBP16.58■□□□□ 0.24
SSBP3-201ENST00000326956 ACBD3Q9H3P7 528 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 ARMT1Q9H993 441 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 PSD3Q9NYI0 1048 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 TJP1Q07157 1748 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 MYH7P12883 1935 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 VGLL3A8MV65 326 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 H3BQF6 201 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
SSBP3-201ENST00000326956 TTLL11Q8NHH1 800 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 CCDC102AQ96A19 550 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 CCDC51Q96ER9 411 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 MED15Q96RN5 788 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 NAPGQ99747 312 aaPredicted RBP16.58■□□□□ 0.24
SSBP3-201ENST00000326956 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
SSBP3-201ENST00000326956 MAP2K7O14733 419 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 PDE8BO95263 885 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 PIP4K2BP78356 416 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 SLC35F6Q8N357 371 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 ATRNO75882 1429 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 N4BP3O15049 544 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 RASGRP2Q7LDG7 609 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 OXER1Q8TDS5 423 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 ZBTB9Q96C00 473 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
SSBP3-201ENST00000326956 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
SSBP3-201ENST00000326956 ACTN2P35609 894 aa16.56■□□□□ 0.24
SSBP3-201ENST00000326956 BEND6Q5SZJ8 279 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-201ENST00000326956 TMTC1Q8IUR5 882 aa16.56■□□□□ 0.24
SSBP3-201ENST00000326956 NUP88Q99567 741 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-201ENST00000326956 ANKZF1Q9H8Y5 726 aa16.56■□□□□ 0.24
SSBP3-201ENST00000326956 FEZ2Q9UHY8 353 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms