RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ABCA8O94911 1581 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 GPT2Q8TD30 523 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 PABPN1LA6NDY0 278 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 PFKFB1P16118 471 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 HAUS7Q99871 368 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 ARHGEF10LQ9HCE6 1279 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 ERVV-2B6SEH9 535 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 ZNF354CQ86Y25 554 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 IFT20Q8IY31 132 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 LRWD1Q9UFC0 647 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 PREX2Q70Z35 1606 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 TLDC2A0PJX2 215 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 NCBP1Q09161 790 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 CCNL1Q9UK58 526 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 UTP14CQ5TAP6 766 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-201ENST00000323853 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 KCNQ3O43525 872 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 GIGYF1O75420 1035 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 XPO4Q9C0E2 1151 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 VPS54Q9P1Q0 977 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 ARPP21Q9UBL0 812 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 EXOC7Q9UPT5 735 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 NR1I2O75469 434 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 UBL4BQ8N7F7 174 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 SEC62Q99442 399 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 SMTNP53814 917 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 CEP128Q6ZU80 1094 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 UBAP1LF5GYI3 381 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 CETN3O15182 167 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 NBPF14Q5TI25 921 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 EDC3Q96F86 508 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 BACH1O14867 736 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 MTMR6Q9Y217 621 aa12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNRNP200-201ENST00000323853 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 SPOPO43791 374 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 MYSM1Q5VVJ2 828 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 FNBP1Q96RU3 617 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 IGSF3O75054 1194 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 TCIRG1Q13488 830 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 PHKG2P15735 406 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 ZBTB16Q05516 673 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 SETDB1Q15047 1291 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 SMC6Q96SB8 1091 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 SSX2IPQ9Y2D8 614 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 ARID4AP29374 1257 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 SP4Q02446 784 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 DNAJC10Q8IXB1 793 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 WWC3Q9ULE0 1092 aa12.16□□□□□ -0.46
SNRNP200-201ENST00000323853 MBD5Q9P267 1494 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 CCDC169A6NNP5 214 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 LIN9Q5TKA1 542 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 SFMBT2Q5VUG0 894 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 GPR161Q8N6U8 529 aaKnown RBP12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 TGFBRAP1Q8WUH2 860 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 IQCDQ96DY2 449 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 CCDC51Q96ER9 411 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 PSMD1Q99460 953 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 AGTPBP1Q9UPW5 1226 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 BIRC3Q13489 604 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 CSRNP2Q9H175 543 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 GOLGA6CA6NDK9 693 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 GOLGA6DP0CG33 693 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 HPDP32754 393 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 RNASE9P60153 205 aaKnown RBP12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 ZNF654Q8IZM8 581 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 SLF1Q9BQI6 1058 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 GOLGA6AQ9NYA3 693 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 SERPINA10Q9UK55 444 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 DNM3Q9UQ16 869 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 B4GALNT4Q76KP1 1039 aa12.15□□□□□ -0.46
SNRNP200-201ENST00000323853 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.47
SNRNP200-201ENST00000323853 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.47
SNRNP200-201ENST00000323853 HSPD1P10809 573 aaKnown RBP12.15□□□□□ -0.47
SNRNP200-201ENST00000323853 NOSTRINQ8IVI9 506 aa12.15□□□□□ -0.47
SNRNP200-201ENST00000323853 MAPKAPK5Q8IW41 473 aa12.15□□□□□ -0.47
SNRNP200-201ENST00000323853 ACTN4O43707 911 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms