RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SPINK5Q9NQ38 1064 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 MTUS1Q9ULD2 1270 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 RPSAP08865 295 aaKnown RBP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 ZNF131P52739 623 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 COG7P83436 770 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 SEL1L2Q5TEA6 688 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 LRP2BPQ9P2M1 347 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 ABCC4O15439 1325 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 SLC27A2O14975 620 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 CD2BP2O95400 341 aaKnown RBP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 PAK1Q13153 545 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 STXBP4Q6ZWJ1 553 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 SND1Q7KZF4 910 aaKnown RBP eCLIP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 CACTINQ8WUQ7 758 aaKnown RBP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 MAP3K2Q9Y2U5 619 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 SNX14Q9Y5W7 946 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 IKQ13123 557 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 ARHGEF10O15013 1369 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 DESI2Q9BSY9 194 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 LRRC2Q9BYS8 371 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 TM6SF1Q9BZW5 370 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 NDC80O14777 642 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 NLRP6P59044 892 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 MAP3K21Q5TCX8 1036 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 NFE2L3Q9Y4A8 694 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 HMGB1P1B2RPK0 211 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 SUN1O94901 812 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 HSP90AA5PQ58FG0 334 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 PARD6BQ9BYG5 372 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 CCDC8Q9H0W5 538 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 PTCH1Q13635 1447 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 OPHN1O60890 802 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 GCFC2P16383 781 aaKnown RBP7.84□□□□□ -1.15
SMC1A-201ENST00000322213 GSTA5Q7RTV2 222 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 BPIFA3Q9BQP9 254 aa7.84□□□□□ -1.15
SMC1A-201ENST00000322213 PRC1O43663 620 aa7.84□□□□□ -1.16
SMC1A-201ENST00000322213 TRMT2AQ8IZ69 625 aaKnown RBP7.84□□□□□ -1.16
SMC1A-201ENST00000322213 SYTL4Q96C24 671 aaPredicted RBP7.84□□□□□ -1.16
SMC1A-201ENST00000322213 RILPL1Q5EBL4 403 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 DHX58Q96C10 678 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 GDAP1L1Q96MZ0 367 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 BSDC1Q9NW68 430 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CTTNBP2NLQ9P2B4 639 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 MAGI2Q86UL8 1455 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 I3L4J1 428 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CREB3O43889 395 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 WTAPQ15007 396 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 SPDL1Q96EA4 605 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 SLC24A3Q9HC58 644 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 HOMER3Q9NSC5 361 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 PAG1Q9NWQ8 432 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 MYOM2P54296 1465 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 FLOT1O75955 427 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 GSPT1P15170 499 aaKnown RBP7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CNNM4Q6P4Q7 775 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 SARM1Q6SZW1 724 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC63Q8NA47 563 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 SESN3P58005 492 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 DYNC1I2Q13409 638 aaKnown RBP7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC65Q8IXS2 484 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 TRIML1Q8N9V2 468 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 TSPYL2Q9H2G4 693 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-201ENST00000322213 NOP53Q9NZM5 478 aaKnown RBP7.83□□□□□ -1.16
SMC1A-201ENST00000322213 RWDD2BP57060 319 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 EGFL6Q8IUX8 553 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC170Q8IYT3 715 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 WHAMMQ8TF30 809 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 TSNARE1Q96NA8 513 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CALML3P27482 149 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 ARID5AQ03989 594 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 TCEANC2Q96MN5 208 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 PSD3Q9NYI0 1048 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 ASIC1P78348 528 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CRYMQ14894 314 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 ME3Q16798 604 aa7.83□□□□□ -1.16
SMC1A-201ENST00000322213 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-201ENST00000322213 NBPF10Q6P3W6 841 aaKnown RBP7.83□□□□□ -1.16
SMC1A-201ENST00000322213 TRPC3Q13507 836 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 VSIG1Q86XK7 387 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 UBA5Q9GZZ9 404 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 APOBRQ0VD83 1088 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 DNAJC8O75937 253 aaPredicted RBP7.82□□□□□ -1.16
SMC1A-201ENST00000322213 CAPRIN2Q6IMN6 1127 aaKnown RBP7.82□□□□□ -1.16
SMC1A-201ENST00000322213 ZNF521Q96K83 1311 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 VAMP4O75379 141 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 NR1D1P20393 614 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 TCERG1LQ5VWI1 586 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 VPS52Q8N1B4 723 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 ZNF710Q8N1W2 664 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 PANX2Q96RD6 677 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 NLRP1Q9C000 1473 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 IKBKBO14920 756 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 METTL24Q5JXM2 366 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 FERMT1Q9BQL6 677 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 ZNF608Q9ULD9 1512 aaPredicted RBP7.82□□□□□ -1.16
SMC1A-201ENST00000322213 PNOCQ13519 176 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 FBXO41Q8TF61 875 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 FAM169AQ9Y6X4 670 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms