RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 DENND2AQ9ULE3 1009 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.49□□□□□ -0.57
KARS-202ENST00000319410 ECM29Q5VYK3 1845 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 COL1A1P02452 1464 aaPredicted RBP11.48□□□□□ -0.57
KARS-202ENST00000319410 CCDC158Q5M9N0 1113 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 WDR66Q8TBY9 1149 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 EAF2Q96CJ1 260 aaPredicted RBP11.48□□□□□ -0.57
KARS-202ENST00000319410 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 SALL1Q9NSC2 1324 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 RIOK3O14730 519 aaKnown RBP11.48□□□□□ -0.57
KARS-202ENST00000319410 CA12O43570 354 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 TNNT1P13805 278 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 ADORA1P30542 326 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 BIRC2Q13490 618 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 GORABQ5T7V8 394 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 CLEC17AQ6ZS10 378 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 ARMC9Q7Z3E5 817 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 SMC5Q8IY18 1101 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 C10orf67Q8IYJ2 551 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 ZNF513Q8N8E2 541 aaPredicted RBP11.48□□□□□ -0.57
KARS-202ENST00000319410 FAM53CQ9NYF3 392 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 SERPINA10Q9UK55 444 aa11.48□□□□□ -0.57
KARS-202ENST00000319410 CCDC196A0A1B0GTZ2 297 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
KARS-202ENST00000319410 BORCS6Q96GS4 357 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 MRIQ9BWK5 157 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 TMEM39BQ9GZU3 492 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 PHKA1P46020 1223 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 ABHD8Q96I13 439 aa11.47□□□□□ -0.57
KARS-202ENST00000319410 TEX35Q5T0J7 233 aa11.46□□□□□ -0.57
KARS-202ENST00000319410 AACSQ86V21 672 aa11.46□□□□□ -0.57
KARS-202ENST00000319410 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.57
KARS-202ENST00000319410 DBNDD2Q9BQY9 259 aa11.46□□□□□ -0.57
KARS-202ENST00000319410 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.57
KARS-202ENST00000319410 AKAP11Q9UKA4 1901 aa11.46□□□□□ -0.57
KARS-202ENST00000319410 H0YHG0 523 aa11.46□□□□□ -0.58
KARS-202ENST00000319410 TBC1D8O95759 1140 aa11.46□□□□□ -0.58
KARS-202ENST00000319410 IFIT2P09913 472 aaKnown RBP11.46□□□□□ -0.58
KARS-202ENST00000319410 GYS2P54840 703 aa11.46□□□□□ -0.58
KARS-202ENST00000319410 SARNPP82979 210 aaKnown RBP11.46□□□□□ -0.58
KARS-202ENST00000319410 HDLBPQ00341 1268 aaKnown RBP11.46□□□□□ -0.58
KARS-202ENST00000319410 NCBP1Q09161 790 aaKnown RBP11.46□□□□□ -0.58
KARS-202ENST00000319410 ZSCAN23Q3MJ62 389 aa11.46□□□□□ -0.58
KARS-202ENST00000319410 TTC31Q49AM3 519 aaPredicted RBP11.46□□□□□ -0.58
KARS-202ENST00000319410 LDLRAD1Q5T700 205 aa11.46□□□□□ -0.58
KARS-202ENST00000319410 TEKT1Q969V4 418 aa11.46□□□□□ -0.58
KARS-202ENST00000319410 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 PPP1R12BO60237 982 aaPredicted RBP11.45□□□□□ -0.58
KARS-202ENST00000319410 PRDX5P30044 214 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 TTC39AQ5SRH9 613 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 SUGP1Q8IWZ8 645 aaKnown RBP11.45□□□□□ -0.58
KARS-202ENST00000319410 IL1RAPL2Q9NP60 686 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.45□□□□□ -0.58
KARS-202ENST00000319410 CTAGE5O15320 804 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 USP2O75604 605 aaPredicted RBP11.45□□□□□ -0.58
KARS-202ENST00000319410 DGKZQ13574 1117 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 SUPT20HL1Q3ZLR7 823 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 SPTY2D1Q68D10 685 aaPredicted RBP11.45□□□□□ -0.58
KARS-202ENST00000319410 ANKRD20A12PQ8NF67 263 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 SLC10A4Q96EP9 437 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 TEPSINQ96N21 525 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 MCOLN1Q9GZU1 580 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 CCDC8Q9H0W5 538 aaPredicted RBP11.45□□□□□ -0.58
KARS-202ENST00000319410 PPP2R3BQ9Y5P8 575 aa11.45□□□□□ -0.58
KARS-202ENST00000319410 MAST3O60307 1309 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 IPO7O95373 1038 aaKnown RBP11.44□□□□□ -0.58
KARS-202ENST00000319410 MTA1Q13330 715 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 RASGRF1Q13972 1273 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 SPRYD7Q5W111 196 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
KARS-202ENST00000319410 SYT10Q6XYQ8 523 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 CEP89Q96ST8 783 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 CCDC85CA6NKD9 419 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 IGHDP01880 384 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 TNFAIP1Q13829 316 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 RABEP1Q15276 862 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 SAGE1Q9NXZ1 904 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 HMG20BQ9P0W2 317 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 PAXBP1Q9Y5B6 917 aa11.44□□□□□ -0.58
KARS-202ENST00000319410 APBB1O00213 710 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 ATP5JP18859 108 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 ZC3H12AQ5D1E8 599 aaKnown RBP11.43□□□□□ -0.58
KARS-202ENST00000319410 GPATCH3Q96I76 525 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 ZDHHC15Q96MV8 337 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 R3HDMLQ9H3Y0 253 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 ELP3Q9H9T3 547 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 TLR7Q9NYK1 1049 aaKnown RBP11.43□□□□□ -0.58
KARS-202ENST00000319410 GJA5P36382 358 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
KARS-202ENST00000319410 CENPFP49454 3210 aa11.42□□□□□ -0.58
KARS-202ENST00000319410 TTC41PQ6P2S7 1318 aa11.42□□□□□ -0.58
KARS-202ENST00000319410 MCAMP43121 646 aa11.42□□□□□ -0.58
KARS-202ENST00000319410 IREB2P48200 963 aaKnown RBP11.42□□□□□ -0.58
KARS-202ENST00000319410 NUCB1Q02818 461 aa11.42□□□□□ -0.58
KARS-202ENST00000319410 TCP10Q12799 353 aa11.42□□□□□ -0.58
KARS-202ENST00000319410 GPS2Q13227 327 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms