RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 DNAJB2P25686 324 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 ERVK-9P63128 1117 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 ERVK-24P63145 666 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 MTMR2Q13614 643 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 RABL6Q3YEC7 729 aaPredicted RBP16.43■□□□□ 0.22
SYCN-201ENST00000318438 MFSD14CQ5VZR4 134 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 SLC39A5Q6ZMH5 540 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 GAKO14976 1311 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 TBC1D12O60347 775 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 LPIN2Q92539 896 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 ZNF576Q9H609 170 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 MYH13Q9UKX3 1938 aa16.42■□□□□ 0.22
SYCN-201ENST00000318438 MSCO60682 206 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 ITGB8P26012 769 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
SYCN-201ENST00000318438 CAP2P40123 477 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 BTDP43251 543 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 MRPS5P82675 430 aaKnown RBP16.41■□□□□ 0.22
SYCN-201ENST00000318438 MIER1Q8N108 512 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 EDC3Q96F86 508 aaKnown RBP16.41■□□□□ 0.22
SYCN-201ENST00000318438 NECAB3Q96P71 396 aaPredicted RBP16.41■□□□□ 0.22
SYCN-201ENST00000318438 TBC1D2Q9BYX2 928 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
SYCN-201ENST00000318438 SALL1Q9NSC2 1324 aa16.41■□□□□ 0.22
SYCN-201ENST00000318438 CYP2C19P33261 490 aa16.4■□□□□ 0.22
SYCN-201ENST00000318438 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
SYCN-201ENST00000318438 C1QTNF1Q9BXJ1 281 aa16.4■□□□□ 0.22
SYCN-201ENST00000318438 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
SYCN-201ENST00000318438 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
SYCN-201ENST00000318438 UTYO14607 1347 aa16.4■□□□□ 0.22
SYCN-201ENST00000318438 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
SYCN-201ENST00000318438 BACE1P56817 501 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 SNX17Q15036 470 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 CCDC85BQ15834 202 aaPredicted RBP16.39■□□□□ 0.21
SYCN-201ENST00000318438 ANO1Q5XXA6 986 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 TRMT2AQ8IZ69 625 aaKnown RBP16.39■□□□□ 0.21
SYCN-201ENST00000318438 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 TIFAQ96CG3 184 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 GAS2L1Q99501 681 aaPredicted RBP16.39■□□□□ 0.21
SYCN-201ENST00000318438 REV3LO60673 3130 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 RLFQ13129 1914 aa16.39■□□□□ 0.21
SYCN-201ENST00000318438 PIEZO1Q92508 2521 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 KBTBD13C9JR72 458 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 PHKA1P46020 1223 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 ATP2B2Q01814 1243 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 FERMT2Q96AC1 680 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 PRDM12Q9H4Q4 367 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 GNL3LQ9NVN8 582 aaKnown RBP16.38■□□□□ 0.21
SYCN-201ENST00000318438 MYH2Q9UKX2 1941 aa16.38■□□□□ 0.21
SYCN-201ENST00000318438 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.37■□□□□ 0.21
SYCN-201ENST00000318438 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.37■□□□□ 0.21
SYCN-201ENST00000318438 ADCYAP1R1P41586 468 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 RHBDL3P58872 404 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 JAG1P78504 1218 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 TLE2Q04725 743 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 AKNAD1Q5T1N1 836 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 WDR78Q5VTH9 848 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 ARRDC4Q8NCT1 418 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 DENND2AQ9ULE3 1009 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 HCN4Q9Y3Q4 1203 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 ATAD5Q96QE3 1844 aa16.37■□□□□ 0.21
SYCN-201ENST00000318438 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
SYCN-201ENST00000318438 CYBAP13498 195 aa16.36■□□□□ 0.21
SYCN-201ENST00000318438 SHROOM1Q2M3G4 852 aaPredicted RBP16.36■□□□□ 0.21
SYCN-201ENST00000318438 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
SYCN-201ENST00000318438 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
SYCN-201ENST00000318438 FAM163AQ96GL9 167 aaPredicted RBP16.36■□□□□ 0.21
SYCN-201ENST00000318438 LRFN3Q9BTN0 628 aa16.36■□□□□ 0.21
SYCN-201ENST00000318438 ABCF2Q9UG63 623 aa16.36■□□□□ 0.21
SYCN-201ENST00000318438 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
SYCN-201ENST00000318438 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
SYCN-201ENST00000318438 CHD7Q9P2D1 2997 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 EYA2O00167 538 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 CNMDO75829 334 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 PBX2P40425 430 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 ADGRE1Q14246 886 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 ALDH1L2Q3SY69 923 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 SSH1Q8WYL5 1049 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 PTPRCP08575 1304 aa16.35■□□□□ 0.21
SYCN-201ENST00000318438 SLC15A5A6NIM6 579 aa16.34■□□□□ 0.21
SYCN-201ENST00000318438 SEMA3EO15041 775 aa16.34■□□□□ 0.21
SYCN-201ENST00000318438 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
SYCN-201ENST00000318438 PTPREP23469 700 aa16.34■□□□□ 0.21
SYCN-201ENST00000318438 FPGSQ05932 587 aa16.34■□□□□ 0.21
SYCN-201ENST00000318438 ATG9AQ7Z3C6 839 aa16.34■□□□□ 0.21
SYCN-201ENST00000318438 SLF2Q8IX21 1173 aa16.34■□□□□ 0.21
SYCN-201ENST00000318438 ZGPATQ8N5A5 531 aaKnown RBP16.34■□□□□ 0.21
SYCN-201ENST00000318438 GTF3C2Q8WUA4 911 aaPredicted RBP16.34■□□□□ 0.21
SYCN-201ENST00000318438 TACC3Q9Y6A5 838 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms