RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 UBXN6Q9BZV1 441 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 MED4Q9NPJ6 270 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 ANO2Q9NQ90 1003 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 TLR7Q9NYK1 1049 aaKnown RBP10.8□□□□□ -0.68
CAPN3-201ENST00000318023 GGA3Q9NZ52 723 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 ABT1Q9ULW3 272 aaKnown RBP10.8□□□□□ -0.68
CAPN3-201ENST00000318023 SNED1Q8TER0 1413 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 LAMB2P55268 1798 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 F13A1P00488 732 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 SLC5A1P13866 664 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 CCZ1BP86790 482 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 CCZ1P86791 482 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-201ENST00000318023 PUM3Q15397 648 aaKnown RBP10.8□□□□□ -0.68
CAPN3-201ENST00000318023 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-201ENST00000318023 PODNQ7Z5L7 613 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 COA1Q9GZY4 146 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 L2HGDHQ9H9P8 463 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 TTF2Q9UNY4 1162 aaKnown RBP10.8□□□□□ -0.68
CAPN3-201ENST00000318023 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
CAPN3-201ENST00000318023 ZNF165P49910 485 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 KIF4BQ2VIQ3 1234 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 SLC4A8Q2Y0W8 1093 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 ANGEL2Q5VTE6 544 aaKnown RBP10.79□□□□□ -0.68
CAPN3-201ENST00000318023 MMS22LQ6ZRQ5 1243 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 EXOC4Q96A65 974 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 VPS18Q9P253 973 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 AOX1Q06278 1338 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 KIF1CO43896 1103 aaKnown RBP10.79□□□□□ -0.68
CAPN3-201ENST00000318023 SCP2P22307 547 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 MNAT1P51948 309 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 LRCH2Q5VUJ6 765 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-201ENST00000318023 MNS1Q8NEH6 495 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 DBNDD2Q9BQY9 259 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 TNMDQ9H2S6 317 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 SBF1O95248 1867 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 IL15P40933 162 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-201ENST00000318023 ATP8B2P98198 1209 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 MKRN3Q13064 507 aaKnown RBP10.79□□□□□ -0.68
CAPN3-201ENST00000318023 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 DACT2Q5SW24 774 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 KRT26Q7Z3Y9 468 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 RPAINQ86UA6 219 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 MICALL1Q8N3F8 863 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 SMC1BQ8NDV3 1235 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 XAGE2Q96GT9 111 aa10.79□□□□□ -0.68
CAPN3-201ENST00000318023 DUOX1Q9NRD9 1551 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 SEMA3FQ13275 785 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 GNL2Q13823 731 aaKnown RBP10.78□□□□□ -0.68
CAPN3-201ENST00000318023 SCARF1Q14162 830 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 TTLL12Q14166 644 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-201ENST00000318023 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 FAM173BQ6P4H8 233 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 MOB2Q70IA6 237 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 SUGP1Q8IWZ8 645 aaKnown RBP10.78□□□□□ -0.68
CAPN3-201ENST00000318023 ZSCAN16Q9H4T2 348 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-201ENST00000318023 DACT1Q9NYF0 836 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 SPEF2Q9C093 1822 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 IVLP07476 585 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 UBE4AQ14139 1066 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-201ENST00000318023 AACSQ86V21 672 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 ADARB2Q9NS39 739 aaKnown RBP10.78□□□□□ -0.68
CAPN3-201ENST00000318023 FER1L6Q2WGJ9 1857 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 CENPFP49454 3210 aa10.78□□□□□ -0.68
CAPN3-201ENST00000318023 A0A087WWV3 80 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 VPS37CA5D8V6 355 aaPredicted RBP10.77□□□□□ -0.68
CAPN3-201ENST00000318023 PRDX5P30044 214 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 CORO7P57737 925 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 BIRC2Q13490 618 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 SWT1Q5T5J6 900 aaKnown RBP10.77□□□□□ -0.68
CAPN3-201ENST00000318023 HOMER1Q86YM7 354 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 VGLL2Q8N8G2 317 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 IQUBQ8NA54 791 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 LPIN2Q92539 896 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 MYOZ2Q9NPC6 264 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 MED23Q9ULK4 1368 aa10.77□□□□□ -0.68
CAPN3-201ENST00000318023 VIL1P09327 827 aaKnown RBP10.77□□□□□ -0.69
CAPN3-201ENST00000318023 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-201ENST00000318023 CCDC102BQ68D86 513 aa10.77□□□□□ -0.69
CAPN3-201ENST00000318023 TDRD7Q8NHU6 1098 aaKnown RBP10.77□□□□□ -0.69
CAPN3-201ENST00000318023 CARD6Q9BX69 1037 aa10.77□□□□□ -0.69
CAPN3-201ENST00000318023 COPRSQ9NQ92 184 aa10.77□□□□□ -0.69
CAPN3-201ENST00000318023 DNAI1Q9UI46 699 aa10.77□□□□□ -0.69
CAPN3-201ENST00000318023 CELF2O95319 508 aaKnown RBP10.77□□□□□ -0.69
CAPN3-201ENST00000318023 PPP1R13BQ96KQ4 1090 aa10.77□□□□□ -0.69
CAPN3-201ENST00000318023 TDRD3Q9H7E2 651 aaKnown RBP10.77□□□□□ -0.69
CAPN3-201ENST00000318023 ELP1O95163 1332 aa10.77□□□□□ -0.69
CAPN3-201ENST00000318023 DLEC1Q9Y238 1755 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 TCP10L2B9ZVM9 353 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 KIF2AO00139 706 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 E4F1Q66K89 784 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 ISM2Q6H9L7 571 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 FERMT3Q86UX7 667 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 PNMA8AQ86V59 439 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 LDHDQ86WU2 507 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 EDC3Q96F86 508 aaKnown RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms