RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 EP400Q96L91 3159 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 DCCP43146 1447 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 FOXN1O15353 648 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 SRGAP2O75044 1071 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 RPSAP08865 295 aaKnown RBP8.5□□□□□ -1.05
CDHR3-201ENST00000317716 PDIA3P30101 505 aaKnown RBP8.5□□□□□ -1.05
CDHR3-201ENST00000317716 NOP2P46087 812 aaKnown RBP8.5□□□□□ -1.05
CDHR3-201ENST00000317716 GUCY2FP51841 1108 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 BRD3Q15059 726 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 KIF6Q6ZMV9 814 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 SRGAP1Q7Z6B7 1085 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 MMRN2Q9H8L6 949 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 TUBB4AP04350 444 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 BEND3Q5T5X7 828 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 SRLQ86TD4 932 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 DIS3L2Q8IYB7 885 aaKnown RBP8.49□□□□□ -1.05
CDHR3-201ENST00000317716 DYDC1Q8WWB3 177 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 TAF4BQ92750 862 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 EXOC4Q96A65 974 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 CDK5RAP3Q96JB5 506 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 MAP3K5Q99683 1374 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 NEBLO76041 1014 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 POSTNQ15063 836 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 BRAPQ7Z569 592 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 PIGBQ92521 554 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 TFCP2L1Q9NZI6 479 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 DBNLQ9UJU6 430 aaKnown RBP8.49□□□□□ -1.05
CDHR3-201ENST00000317716 CCNL1Q9UK58 526 aaPredicted RBP8.49□□□□□ -1.05
CDHR3-201ENST00000317716 LUC7L2Q9Y383 392 aaKnown RBP8.49□□□□□ -1.05
CDHR3-201ENST00000317716 SPATA31A6Q5VVP1 1343 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 BTBD18B2RXH4 712 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 USO1O60763 962 aaKnown RBP8.49□□□□□ -1.05
CDHR3-201ENST00000317716 NLRP5P59047 1200 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
CDHR3-201ENST00000317716 FBXW10Q5XX13 1052 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 SPTY2D1Q68D10 685 aaPredicted RBP8.49□□□□□ -1.05
CDHR3-201ENST00000317716 CCDC121Q6ZUS5 278 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 LINC00301Q8NCQ3 95 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 CEP131Q9UPN4 1083 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 ATP10DQ9P241 1426 aa8.49□□□□□ -1.05
CDHR3-201ENST00000317716 AATKQ6ZMQ8 1374 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SYNRGQ9UMZ2 1314 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 PFKFB2O60825 505 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SASH1O94885 1247 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 MCM3P25205 808 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CXCR5P32302 372 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CLNS1AP54105 237 aaKnown RBP8.48□□□□□ -1.05
CDHR3-201ENST00000317716 RBL2Q08999 1139 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 KIF5AQ12840 1032 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 ZFYVE27Q5T4F4 411 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CFAP58Q5T655 872 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 ZNF790Q6PG37 636 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 MICALCLQ6ZW33 695 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 MIGA1Q8NAN2 632 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 UIMC1Q96RL1 719 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 TACO1Q9BSH4 297 aaKnown RBP8.48□□□□□ -1.05
CDHR3-201ENST00000317716 NACAP1Q9BZK3 213 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SLC24A3Q9HC58 644 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CDC23Q9UJX2 597 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SETD1AO15047 1707 aaKnown RBP8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SPATA31A1Q5TZJ5 1347 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 A0A0G2JLW4 131 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 EIF4E1BA6NMX2 242 aaKnown RBP8.48□□□□□ -1.05
CDHR3-201ENST00000317716 GNPATO15228 680 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 RNF113AO15541 343 aaKnown RBP8.48□□□□□ -1.05
CDHR3-201ENST00000317716 ALDH1L1O75891 902 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 MCM7P33993 719 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 LDHAL6AQ6ZMR3 332 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 PNMA8AQ86V59 439 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-201ENST00000317716 PHLPP2Q6ZVD8 1323 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CCDC151A5D8V7 595 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 KRT86O43790 486 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CDC25AP30304 524 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SLC7A5Q01650 507 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SARM1Q6SZW1 724 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 CCDC42Q96M95 316 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 TRIM31Q9BZY9 425 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 SLC52A2Q9HAB3 445 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 FBXO3Q9UK99 471 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 MYO6Q9UM54 1294 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 KIF24Q5T7B8 1368 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
CDHR3-201ENST00000317716 TRIM75PA6NK02 468 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 KRT18P05783 430 aaKnown RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 VSNL1P62760 191 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 RTN1Q16799 776 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 WASF1Q92558 559 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 EFCC1Q9HA90 598 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 HDAC6Q9UBN7 1215 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 BAIAP2L1Q9UHR4 511 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 USP32Q8NFA0 1604 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 FMN2Q9NZ56 1722 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 H3BQF6 201 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 PRDM1O75626 825 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms