RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 MTMR2Q13614 643 aa24.5■■□□□ 1.51
SERF1A-201ENST00000317633 CEP85Q6P2H3 762 aa24.5■■□□□ 1.51
SERF1A-201ENST00000317633 MS4A1P11836 297 aa24.49■■□□□ 1.51
SERF1A-201ENST00000317633 HSP90AB4PQ58FF6 505 aa24.49■■□□□ 1.51
SERF1A-201ENST00000317633 DIEXFQ68CQ4 756 aaKnown RBP24.49■■□□□ 1.51
SERF1A-201ENST00000317633 DNAJC18Q9H819 358 aa24.49■■□□□ 1.51
SERF1A-201ENST00000317633 COLQQ9Y215 455 aaPredicted RBP24.49■■□□□ 1.51
SERF1A-201ENST00000317633 ZBED9Q6R2W3 1325 aa24.49■■□□□ 1.51
SERF1A-201ENST00000317633 USP17L10C9JJH3 530 aa24.48■■□□□ 1.51
SERF1A-201ENST00000317633 FARP2O94887 1054 aaPredicted RBP24.48■■□□□ 1.51
SERF1A-201ENST00000317633 HOXA7P31268 230 aaPredicted RBP24.48■■□□□ 1.51
SERF1A-201ENST00000317633 DYNLL1P63167 89 aaKnown RBP24.48■■□□□ 1.51
SERF1A-201ENST00000317633 MAP3K12Q12852 859 aa24.48■■□□□ 1.51
SERF1A-201ENST00000317633 UBE2Q1Q7Z7E8 422 aa24.48■■□□□ 1.51
SERF1A-201ENST00000317633 SAP30BPQ9UHR5 308 aaKnown RBP24.48■■□□□ 1.51
SERF1A-201ENST00000317633 CEP290O15078 2479 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 GDF11O95390 407 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 TFRCP02786 760 aaKnown RBP24.47■■□□□ 1.51
SERF1A-201ENST00000317633 USP5P45974 858 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 AACSQ86V21 672 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 MAGEB6Q8N7X4 407 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 MORF4L1Q9UBU8 362 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 ZBTB21Q9ULJ3 1066 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 EXOC6BQ9Y2D4 811 aa24.47■■□□□ 1.51
SERF1A-201ENST00000317633 MIGA1Q8NAN2 632 aa24.46■■□□□ 1.51
SERF1A-201ENST00000317633 DEFB118Q96PH6 123 aa24.46■■□□□ 1.51
SERF1A-201ENST00000317633 NR2E3Q9Y5X4 410 aa24.46■■□□□ 1.51
SERF1A-201ENST00000317633 JAG1P78504 1218 aa24.45■■□□□ 1.5
SERF1A-201ENST00000317633 PANK1Q8TE04 598 aa24.45■■□□□ 1.5
SERF1A-201ENST00000317633 PAK6Q9NQU5 681 aaPredicted RBP24.45■■□□□ 1.5
SERF1A-201ENST00000317633 HMGCRP04035 888 aa24.44■■□□□ 1.5
SERF1A-201ENST00000317633 TTC6Q86TZ1 520 aa24.44■■□□□ 1.5
SERF1A-201ENST00000317633 P2RX7Q99572 595 aaKnown RBP24.44■■□□□ 1.5
SERF1A-201ENST00000317633 FXR1P51114 621 aaKnown RBP eCLIP24.43■■□□□ 1.5
SERF1A-201ENST00000317633 HERVK_113P62684 666 aa24.43■■□□□ 1.5
SERF1A-201ENST00000317633 TTF1Q15361 905 aaPredicted RBP24.43■■□□□ 1.5
SERF1A-201ENST00000317633 GPRC5AQ8NFJ5 357 aa24.43■■□□□ 1.5
SERF1A-201ENST00000317633 GTF3C2Q8WUA4 911 aaPredicted RBP24.43■■□□□ 1.5
SERF1A-201ENST00000317633 EHD4Q9H223 541 aa24.43■■□□□ 1.5
SERF1A-201ENST00000317633 ANTXR1Q9H6X2 564 aa24.43■■□□□ 1.5
SERF1A-201ENST00000317633 SERPINB13Q9UIV8 391 aa24.43■■□□□ 1.5
SERF1A-201ENST00000317633 GJD2Q9UKL4 321 aa24.43■■□□□ 1.5
SERF1A-201ENST00000317633 NDUFB9Q9Y6M9 179 aa24.43■■□□□ 1.5
SERF1A-201ENST00000317633 TATDN1Q6P1N9 297 aa24.42■■□□□ 1.5
SERF1A-201ENST00000317633 USP17L2Q6R6M4 530 aa24.42■■□□□ 1.5
SERF1A-201ENST00000317633 RHPN1Q8TCX5 695 aa24.42■■□□□ 1.5
SERF1A-201ENST00000317633 GH2P01242 217 aa24.41■■□□□ 1.5
SERF1A-201ENST00000317633 CHRDL2Q6WN34 429 aa24.41■■□□□ 1.5
SERF1A-201ENST00000317633 CLASRPQ8N2M8 674 aaKnown RBP24.41■■□□□ 1.5
SERF1A-201ENST00000317633 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.41■■□□□ 1.5
SERF1A-201ENST00000317633 RPTORQ8N122 1335 aa24.4■■□□□ 1.5
SERF1A-201ENST00000317633 HMMRO75330 724 aa24.4■■□□□ 1.5
SERF1A-201ENST00000317633 SHROOM1Q2M3G4 852 aaPredicted RBP24.4■■□□□ 1.5
SERF1A-201ENST00000317633 CCAR1Q8IX12 1150 aaKnown RBP24.4■■□□□ 1.5
SERF1A-201ENST00000317633 RPAP2Q8IXW5 612 aaPredicted RBP24.4■■□□□ 1.5
SERF1A-201ENST00000317633 SOCS4Q8WXH5 440 aa24.4■■□□□ 1.5
SERF1A-201ENST00000317633 NUDT12Q9BQG2 462 aa24.4■■□□□ 1.5
SERF1A-201ENST00000317633 CRISPLD2Q9H0B8 497 aa24.4■■□□□ 1.5
SERF1A-201ENST00000317633 HMX1Q9NP08 348 aaPredicted RBP24.4■■□□□ 1.5
SERF1A-201ENST00000317633 IL1RAPL2Q9NP60 686 aa24.4■■□□□ 1.5
SERF1A-201ENST00000317633 PLXNB2O15031 1838 aa24.4■■□□□ 1.5
SERF1A-201ENST00000317633 MAPK4P31152 587 aa24.39■■□□□ 1.49
SERF1A-201ENST00000317633 PDE3AQ14432 1141 aa24.39■■□□□ 1.49
SERF1A-201ENST00000317633 CERKLQ49MI3 558 aaPredicted RBP24.39■■□□□ 1.49
SERF1A-201ENST00000317633 ANKLE1Q8NAG6 615 aa24.39■■□□□ 1.49
SERF1A-201ENST00000317633 KIF1BPQ96EK5 621 aa24.39■■□□□ 1.49
SERF1A-201ENST00000317633 FEZ1Q99689 392 aa24.39■■□□□ 1.49
SERF1A-201ENST00000317633 CABP5Q9NP86 173 aa24.39■■□□□ 1.49
SERF1A-201ENST00000317633 EMILIN3Q9NT22 766 aa24.39■■□□□ 1.49
SERF1A-201ENST00000317633 EVI5O60447 810 aa24.38■■□□□ 1.49
SERF1A-201ENST00000317633 USP14P54578 494 aa24.38■■□□□ 1.49
SERF1A-201ENST00000317633 C12orf42Q96LP6 360 aa24.38■■□□□ 1.49
SERF1A-201ENST00000317633 CHMP4BQ9H444 224 aaKnown RBP24.38■■□□□ 1.49
SERF1A-201ENST00000317633 TXNRD2Q9NNW7 524 aa24.38■■□□□ 1.49
SERF1A-201ENST00000317633 RBPJLQ9UBG7 517 aa24.38■■□□□ 1.49
SERF1A-201ENST00000317633 DDX19BQ9UMR2 479 aa24.38■■□□□ 1.49
SERF1A-201ENST00000317633 MAGEB6P1A0A0J9YX57 407 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 IFIT2P09913 472 aaKnown RBP24.37■■□□□ 1.49
SERF1A-201ENST00000317633 XRCC5P13010 732 aaKnown RBP24.37■■□□□ 1.49
SERF1A-201ENST00000317633 CYP2B6P20813 491 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 ERVK-9P63128 1117 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 ERVK-24P63145 666 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 RAB3GAP1Q15042 981 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 ABCB5Q2M3G0 1257 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 SLC9C2Q5TAH2 1124 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 NECAB2Q7Z6G3 386 aa24.37■■□□□ 1.49
SERF1A-201ENST00000317633 TRMT44Q8IYL2 757 aaKnown RBP24.37■■□□□ 1.49
SERF1A-201ENST00000317633 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.37■■□□□ 1.49
SERF1A-201ENST00000317633 PAWRQ96IZ0 340 aaKnown RBP24.37■■□□□ 1.49
SERF1A-201ENST00000317633 RIOK1Q9BRS2 568 aaKnown RBP24.37■■□□□ 1.49
SERF1A-201ENST00000317633 NAV1Q8NEY1 1877 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 TRIOBPQ9H2D6 2365 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L15C9J2P7 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L13C9JLJ4 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L11C9JVI0 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L18D6R9N7 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L22D6RA61 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L17D6RBQ6 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L19D6RCP7 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L20D6RJB6 530 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms