RNA–Protein interactions for RNA: ENST00000314675.11

UBXN11-201, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-201ENST00000314675 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
UBXN11-201ENST00000314675 RBSNQ9H1K0 784 aa23.13■■□□□ 1.29
UBXN11-201ENST00000314675 MKNK2Q9HBH9 465 aa23.13■■□□□ 1.29
UBXN11-201ENST00000314675 MYH15Q9Y2K3 1946 aa23.13■■□□□ 1.29
UBXN11-201ENST00000314675 LIG1P18858 919 aa23.13■■□□□ 1.29
UBXN11-201ENST00000314675 QSER1Q2KHR3 1735 aa23.12■■□□□ 1.29
UBXN11-201ENST00000314675 MYSM1Q5VVJ2 828 aa23.12■■□□□ 1.29
UBXN11-201ENST00000314675 RCSD1Q6JBY9 416 aa23.12■■□□□ 1.29
UBXN11-201ENST00000314675 SLC44A5Q8NCS7 719 aa23.12■■□□□ 1.29
UBXN11-201ENST00000314675 WASF1Q92558 559 aa23.12■■□□□ 1.29
UBXN11-201ENST00000314675 IL17RBQ9NRM6 502 aa23.12■■□□□ 1.29
UBXN11-201ENST00000314675 TRIM29Q14134 588 aa23.11■■□□□ 1.29
UBXN11-201ENST00000314675 CDK5RAP2Q96SN8 1893 aa23.11■■□□□ 1.29
UBXN11-201ENST00000314675 RTEL1Q9NZ71 1219 aa23.11■■□□□ 1.29
UBXN11-201ENST00000314675 LETM1O95202 739 aaPredicted RBP23.1■■□□□ 1.29
UBXN11-201ENST00000314675 DEXIO95424 95 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 CALM1P0DP23 149 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 CALM2P0DP24 149 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 CALM3P0DP25 149 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 NASPP49321 788 aaPredicted RBP23.1■■□□□ 1.29
UBXN11-201ENST00000314675 SCNN1DP51172 638 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 NAV1Q8NEY1 1877 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 DDAH1O94760 285 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 NT5C2P49902 561 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 BICD2Q8TD16 824 aa23.1■■□□□ 1.29
UBXN11-201ENST00000314675 FUT2Q10981 343 aa23.09■■□□□ 1.29
UBXN11-201ENST00000314675 ZNF444Q8N0Y2 327 aaPredicted RBP23.09■■□□□ 1.29
UBXN11-201ENST00000314675 DACT1Q9NYF0 836 aa23.09■■□□□ 1.29
UBXN11-201ENST00000314675 CLIC4Q9Y696 253 aa23.09■■□□□ 1.29
UBXN11-201ENST00000314675 DLEC1Q9Y238 1755 aa23.09■■□□□ 1.29
UBXN11-201ENST00000314675 PLEKHA8P1O95397 391 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 RNF26Q9BY78 433 aaPredicted RBP23.08■■□□□ 1.29
UBXN11-201ENST00000314675 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.29
UBXN11-201ENST00000314675 USP17L3A6NCW0 530 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 USP17L4A6NCW7 530 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 TSPY3P0CV98 308 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 TSPY8P0CW00 308 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 U2AF2P26368 475 aaKnown RBP eCLIP23.08■■□□□ 1.29
UBXN11-201ENST00000314675 USP17L1Q7RTZ2 530 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 DGKHQ86XP1 1220 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 TSPY26PQ9H489 355 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 POLR3EQ9NVU0 708 aa23.08■■□□□ 1.29
UBXN11-201ENST00000314675 ECM29Q5VYK3 1845 aa23.08■■□□□ 1.28
UBXN11-201ENST00000314675 ECE2O60344 883 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 RASA1P20936 1047 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 CDK8P49336 464 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 GNL2Q13823 731 aaKnown RBP23.07■■□□□ 1.28
UBXN11-201ENST00000314675 C16orf86Q6ZW13 317 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 LINC00301Q8NCQ3 95 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 ZNF287Q9HBT7 754 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 NR1I2O75469 434 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 ME1P48163 572 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 PICALMQ13492 652 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 KCNJ14Q9UNX9 436 aa23.07■■□□□ 1.28
UBXN11-201ENST00000314675 C21orf2O43822 256 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 MMP1P03956 469 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 AOC3Q16853 763 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 STRIP1Q5VSL9 837 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 HHIPL2Q6UWX4 724 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 CTCFLQ8NI51 663 aaPredicted RBP23.06■■□□□ 1.28
UBXN11-201ENST00000314675 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.06■■□□□ 1.28
UBXN11-201ENST00000314675 WDHD1O75717 1129 aaPredicted RBP23.06■■□□□ 1.28
UBXN11-201ENST00000314675 CAMK4Q16566 473 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 TEKT1Q969V4 418 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 KAT14Q9H8E8 782 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 TCP11L1Q9NUJ3 509 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 USP40Q9NVE5 1235 aa23.06■■□□□ 1.28
UBXN11-201ENST00000314675 V9GY48 417 aaPredicted RBP23.06■■□□□ 1.28
UBXN11-201ENST00000314675 AKAP17AQ02040 695 aaKnown RBP23.05■■□□□ 1.28
UBXN11-201ENST00000314675 PKN1Q16512 942 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 APOBEC3HQ6NTF7 200 aaKnown RBP23.05■■□□□ 1.28
UBXN11-201ENST00000314675 TMTC3Q6ZXV5 915 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 ANKS1AQ92625 1134 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 DDX4Q9NQI0 724 aaKnown RBP23.05■■□□□ 1.28
UBXN11-201ENST00000314675 PCDHA7Q9UN72 937 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 SNED1Q8TER0 1413 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 hCG_1642624A0A1W2PR95 340 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 BTBD18B2RXH4 712 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 PRPF3O43395 683 aaKnown RBP23.05■■□□□ 1.28
UBXN11-201ENST00000314675 DACT2Q5SW24 774 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 CC2D2BQ6DHV5 1058 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 KIAA0825Q8IV33 1275 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 NUP62CLQ9H1M0 184 aa23.05■■□□□ 1.28
UBXN11-201ENST00000314675 DDX60LQ5H9U9 1706 aaKnown RBP23.04■■□□□ 1.28
UBXN11-201ENST00000314675 YEATS4O95619 227 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 KIAA2012Q0VF49 1180 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 STK38Q15208 465 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 ANO1Q5XXA6 986 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 SRBD1Q8N5C6 995 aaKnown RBP23.04■■□□□ 1.28
UBXN11-201ENST00000314675 RNF214Q8ND24 703 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 PNMA1Q8ND90 353 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 MYH1P12882 1939 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 C10orf71Q711Q0 1435 aa23.04■■□□□ 1.28
UBXN11-201ENST00000314675 CCDC178Q5BJE1 867 aa23.03■■□□□ 1.28
UBXN11-201ENST00000314675 CDC42EP5Q6NZY7 148 aa23.03■■□□□ 1.28
UBXN11-201ENST00000314675 CCAR1Q8IX12 1150 aaKnown RBP23.03■■□□□ 1.28
UBXN11-201ENST00000314675 DIS3L2Q8IYB7 885 aaKnown RBP23.03■■□□□ 1.28
UBXN11-201ENST00000314675 SLC16A10Q8TF71 515 aa23.03■■□□□ 1.28
UBXN11-201ENST00000314675 DDX19AQ9NUU7 478 aaKnown RBP23.03■■□□□ 1.28
UBXN11-201ENST00000314675 SCN9AQ15858 1988 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms