RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 MYO1BO43795 1136 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 DHX16O60231 1041 aaKnown RBP15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 BRD1O95696 1058 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 LMOD1P29536 600 aaPredicted RBP15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 PLCD1P51178 756 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 SEC23AQ15436 765 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 TTC6Q86TZ1 520 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 TMOD2Q9NZR1 351 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 PGAP2Q9UHJ9 254 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 HPS5Q9UPZ3 1129 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 ZDHHC9Q9Y397 364 aa15.04■□□□□ -0
SHANK2-AS3-201ENST00000307548 NID2Q14112 1375 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 SIPA1L1O43166 1804 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 SCN4AP35499 1836 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 ERICH2A1L162 156 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 GJB2P29033 226 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 HMGN5P82970 282 aaKnown RBP15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 STK3Q13188 491 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 CCDC178Q5BJE1 867 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 APOA5Q6Q788 366 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 C16orf86Q6ZW13 317 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 FAM83AQ86UY5 434 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 IQCA1Q86XH1 822 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 FAM151AQ8WW52 585 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 UBAC1Q9BSL1 405 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 TCP11L1Q9NUJ3 509 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 HACL1Q9UJ83 578 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 TCP10L2B9ZVM9 353 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 RANBP6O60518 1105 aaKnown RBP15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 PDCP20941 246 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 GABPAQ06546 454 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 TCP10Q12799 353 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 WTAPQ15007 396 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 NFKBIBQ15653 356 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 ANKS1AQ92625 1134 aa15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 ZSCAN10Q96SZ4 725 aaPredicted RBP15.03■□□□□ -0
SHANK2-AS3-201ENST00000307548 SYT1P21579 422 aa15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 PPP2R5BQ15173 497 aa15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 SLC4A8Q2Y0W8 1093 aa15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 METTL16Q86W50 562 aaKnown RBP15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 RGS22Q8NE09 1264 aa15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 NSUN7Q8NE18 718 aaKnown RBP15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 EHD4Q9H223 541 aa15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 DHX36Q9H2U1 1008 aaKnown RBP15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 VEZTQ9HBM0 779 aa15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 WDR33Q9C0J8 1336 aaKnown RBP15.02□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 CCDC69A6NI79 296 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 GOLGA8BA8MQT2 603 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 ZBTB43O43298 467 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 CTDNEP1O95476 244 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 EPHX2P34913 555 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 PKP1Q13835 747 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 SYNE3Q6ZMZ3 975 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 USP50Q70EL3 339 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 STK11IPQ8N1F8 1099 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 DYNLL2Q96FJ2 89 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TAF1DQ9H5J8 278 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 MKNK2Q9HBH9 465 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 SLC12A7Q9Y666 1083 aa15.01□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 IQCA1LA6NCM1 817 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 STX6O43752 255 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 PRDM1O75626 825 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 CDK8P49336 464 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 CCT2P78371 535 aaKnown RBP15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 RASA3Q14644 834 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 ANGEL2Q5VTE6 544 aaKnown RBP15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 NFXL1Q6ZNB6 911 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 DGKHQ86XP1 1220 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 ZNF444Q8N0Y2 327 aaPredicted RBP15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 ENAHQ8N8S7 591 aaPredicted RBP15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 ZNF526Q8TF50 670 aaPredicted RBP15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TEPSINQ96N21 525 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 SENP2Q9HC62 589 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 GGA3Q9NZ52 723 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 KIF3AQ9Y496 699 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TNKSO95271 1327 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 PITPNM2Q9BZ72 1349 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 RASA1P20936 1047 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 CDAN1Q8IWY9 1227 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 SLC44A5Q8NCS7 719 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 GBP4Q96PP9 640 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TMEM39BQ9GZU3 492 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 DNAJC18Q9H819 358 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 NCOA5Q9HCD5 579 aaKnown RBP15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 SWAP70Q9UH65 585 aa15□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TSPY2A6NKD2 308 aa14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 ATXN8OSP0DMR3 200 aa14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TNNI2P48788 182 aa14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 METAP2P50579 478 aaKnown RBP eCLIP14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TFAP4Q01664 338 aa14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 TNFAIP1Q13829 316 aa14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 LARP1BQ659C4 914 aaKnown RBP14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 APOBEC3FQ8IUX4 373 aaKnown RBP14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 NEDD1Q8NHV4 660 aa14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 ZKSCAN3Q9BRR0 538 aa14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 FAM217BQ9NTX9 383 aaPredicted RBP14.99□□□□□ -0.01
SHANK2-AS3-201ENST00000307548 PI4KBQ9UBF8 816 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms