RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 DKC1O60832 514 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRE-202ENST00000306042 ARID4AP29374 1257 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-202ENST00000306042 NOM1Q5C9Z4 860 aaKnown RBP10.54□□□□□ -0.72
PTPRE-202ENST00000306042 TCERG1LQ5VWI1 586 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 MCF2L2Q86YR7 1114 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 CCPG1Q9ULG6 757 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 BCL9O00512 1426 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 A0A0U1RQG5 324 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 KLRF2D3W0D1 207 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 CHMP2AO43633 222 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 HOXD10P28358 340 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 FBXO11Q86XK2 927 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 FAM84BQ96KN1 310 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 NCOA5Q9HCD5 579 aaKnown RBP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 EXOC1Q9NV70 894 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 ARHGEF16Q5VV41 709 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 ADAMTSL3P82987 1691 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 PRKAB2O43741 272 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 MARCKSP29966 332 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 BMS1Q14692 1282 aaKnown RBP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 C9orf131Q5VYM1 1079 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 NLRX1Q86UT6 975 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 CTAGE5O15320 804 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 RFX1P22670 979 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 NONOQ15233 471 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTPRE-202ENST00000306042 FKBP15Q5T1M5 1219 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 KRT25Q7Z3Z0 450 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 BRAPQ7Z569 592 aa10.53□□□□□ -0.72
PTPRE-202ENST00000306042 PIK3AP1Q6ZUJ8 805 aa10.52□□□□□ -0.72
PTPRE-202ENST00000306042 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.72
PTPRE-202ENST00000306042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.52□□□□□ -0.72
PTPRE-202ENST00000306042 GDPD2Q9HCC8 539 aa10.52□□□□□ -0.72
PTPRE-202ENST00000306042 LPXNO60711 386 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 GOLGA8HP0CJ92 632 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 SYKP43405 635 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 USP37Q86T82 979 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 REXO1Q8N1G1 1221 aaKnown RBP10.52□□□□□ -0.73
PTPRE-202ENST00000306042 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 GINS2Q9Y248 185 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 SUGT1Q9Y2Z0 365 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 FAM13AO94988 1023 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 CCDC40Q4G0X9 1142 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 RRAGBQ5VZM2 374 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 ZNF592Q92610 1267 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 CD2APQ9Y5K6 639 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 SIGLEC1Q9BZZ2 1709 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 hCG_1642624A0A1W2PR95 340 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 GCOM1H8Y6P7 765 aaPredicted RBP10.52□□□□□ -0.73
PTPRE-202ENST00000306042 POLR2MP0CAP2 368 aa10.52□□□□□ -0.73
PTPRE-202ENST00000306042 HSP90AA2PQ14568 343 aaPredicted RBP10.52□□□□□ -0.73
PTPRE-202ENST00000306042 SH3RF3Q8TEJ3 882 aaPredicted RBP10.52□□□□□ -0.73
PTPRE-202ENST00000306042 PUS7LQ9H0K6 701 aaKnown RBP10.52□□□□□ -0.73
PTPRE-202ENST00000306042 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
PTPRE-202ENST00000306042 TESPA1A2RU30 521 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 EPB41L2O43491 1005 aaKnown RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 CCNT1O60563 726 aaKnown RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 FAM47CQ5HY64 1035 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 PHKBQ93100 1093 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 MLXIPQ9HAP2 919 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 DDX19AQ9NUU7 478 aaKnown RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 ZHX2Q9Y6X8 837 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 MED23Q9ULK4 1368 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 DDX39AO00148 427 aaKnown RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 MCM4P33991 863 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 GMPSP49915 693 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 ASIC1P78348 528 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 MAP3K9P80192 1104 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 PTH1RQ03431 593 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 PDE4DQ08499 809 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 RMND1Q9NWS8 449 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 MROH7-TTC4A0A0A0MT08 1334 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 M0R2C6 588 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 BMP3P12645 472 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 GSPT1P15170 499 aaKnown RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 HSPA4P34932 840 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 AFMP43652 599 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 ZNF174Q15697 407 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 C8orf34Q49A92 452 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 RILPL1Q5EBL4 403 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 LLPHQ9BRT6 129 aaKnown RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 RIPOR2Q9Y4F9 1068 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 SMCO2A6NFE2 343 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 SPTLC2O15270 562 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 PDIA6Q15084 440 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 RSBN1LQ6PCB5 846 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 TMEM179Q6ZVK1 233 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 APBB1IPQ7Z5R6 666 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-202ENST00000306042 GLG1Q92896 1179 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 OSBP2Q969R2 916 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 DYNLL2Q96FJ2 89 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 PSTPIP2Q9H939 334 aa10.51□□□□□ -0.73
PTPRE-202ENST00000306042 GH2P01242 217 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 RPS12P25398 132 aaKnown RBP10.5□□□□□ -0.73
PTPRE-202ENST00000306042 CCDC173Q0VFZ6 552 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 RABL6Q3YEC7 729 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms