RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 A0A1B0GVL5 298 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 A0A1W2PQ27 194 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 A0A1W2PQ64 194 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 A0A1W2PQD8 194 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 DEXIO95424 95 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 BAG3O95817 575 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 NPR1P16066 1061 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 HMGB2P26583 209 aaKnown RBP7.59□□□□□ -1.2
USP47-201ENST00000305481 BTDP43251 543 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 NDUFA8P51970 172 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 RHBDL3P58872 404 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 SLC39A14Q15043 492 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 STK38Q15208 465 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 TMC4Q7Z404 712 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 TRIM22Q8IYM9 498 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 KCNG4Q8TDN1 519 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 TRIM44Q96DX7 344 aaPredicted RBP7.59□□□□□ -1.2
USP47-201ENST00000305481 USP25Q9UHP3 1055 aa7.59□□□□□ -1.2
USP47-201ENST00000305481 FAM205AQ6ZU69 1335 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 TNS1Q9HBL0 1735 aaKnown RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 CDK5RAP2Q96SN8 1893 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 ROBO3Q96MS0 1386 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 hCG_1642624A0A1W2PR95 340 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 ESPNB1AK53 854 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 TOB1P50616 345 aaPredicted RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 PDE4BQ07343 736 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 TRIM29Q14134 588 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 PPP2R5BQ15173 497 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 CATIPQ7Z7H3 387 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 MAPKAPK5Q8IW41 473 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 WASF1Q92558 559 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 FAM163AQ96GL9 167 aaPredicted RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 DDAH1O94760 285 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 LDHCP07864 332 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 SLC3A2P08195 630 aaKnown RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 GTF2IP78347 998 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 NOSTRINQ8IVI9 506 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 CERS5Q8N5B7 392 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 SLC44A5Q8NCS7 719 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 MRPS27Q92552 414 aaKnown RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 RNF26Q9BY78 433 aaPredicted RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 SAP30BPQ9UHR5 308 aaKnown RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 GAKO14976 1311 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 MARCKSP29966 332 aaPredicted RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 TFAP4Q01664 338 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 NR5A1Q13285 461 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 ANO6Q4KMQ2 910 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 CCDC73Q6ZRK6 1079 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 DIS3L2Q8IYB7 885 aaKnown RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 SRBD1Q8N5C6 995 aaKnown RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 FLAD1Q8NFF5 587 aa7.58□□□□□ -1.2
USP47-201ENST00000305481 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 V9GY48 417 aaPredicted RBP7.58□□□□□ -1.2
USP47-201ENST00000305481 TSPY2A6NKD2 308 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 PRPF3O43395 683 aaKnown RBP7.57□□□□□ -1.2
USP47-201ENST00000305481 TMTC3Q6ZXV5 915 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 MPNDQ8N594 471 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 MXD3Q9BW11 206 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 PARP3Q9Y6F1 533 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 NAV1Q8NEY1 1877 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 DDX60LQ5H9U9 1706 aaKnown RBP7.57□□□□□ -1.2
USP47-201ENST00000305481 USP17L3A6NCW0 530 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 USP17L4A6NCW7 530 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 CALM1P0DP23 149 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 CALM2P0DP24 149 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 CALM3P0DP25 149 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 PDE6BP35913 854 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 GNL2Q13823 731 aaKnown RBP7.57□□□□□ -1.2
USP47-201ENST00000305481 USP17L1Q7RTZ2 530 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 LUZP1Q86V48 1076 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 FAM200AQ8TCP9 573 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 TBC1D22AQ8WUA7 517 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 ERCC4Q92889 916 aaPredicted RBP7.57□□□□□ -1.2
USP47-201ENST00000305481 MASTLQ96GX5 879 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 COA1Q9GZY4 146 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 FOXP1Q9H334 677 aaPredicted RBP7.57□□□□□ -1.2
USP47-201ENST00000305481 CBX8Q9HC52 389 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 VPS54Q9P1Q0 977 aa7.57□□□□□ -1.2
USP47-201ENST00000305481 A0A087WWV3 80 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 PPP6R2O75170 966 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 ADCY5O95622 1261 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 VEGFAP15692 232 aaPredicted RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 RASA1P20936 1047 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 CMA1P23946 247 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 ALDH1B1P30837 517 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 RBM10P98175 930 aaKnown RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 DOK7Q18PE1 504 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 HS1BP3Q53T59 392 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 SHC4Q6S5L8 630 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 POTEAQ6S8J7 498 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 TEX11Q8IYF3 940 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 ANKS1AQ92625 1134 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 PHF20Q9BVI0 1012 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 RBM28Q9NW13 759 aaKnown RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 DAGLAQ9Y4D2 1042 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 FLT1P17948 1338 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 CNTNAP5Q8WYK1 1306 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms