RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 HSPA4P34932 840 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 BTDP43251 543 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 MTFR1Q15390 333 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 MCTP1Q6DN14 999 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 C17orf99Q6UX52 265 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 SH3BP5LQ7L8J4 393 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 ANKRD23Q86SG2 305 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 TRIM47Q96LD4 638 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 ANO2Q9NQ90 1003 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 COPRSQ9NQ92 184 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 ZNF112Q9UJU3 913 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 DDTLA6NHG4 134 aaPredicted RBP9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 TRIM75PA6NK02 468 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 SEMA3EO15041 775 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 BRD1O95696 1058 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 CLCN1P35523 988 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 PKP1Q13835 747 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 PI16Q6UXB8 463 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 IL1RAPL2Q9NP60 686 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 DDX4Q9NQI0 724 aaKnown RBP9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 RAI14Q9P0K7 980 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 PALD1Q9ULE6 856 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 AKAP2Q9Y2D5 859 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 RAD50Q92878 1312 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 SGSM2O43147 1006 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 GLRX3O76003 335 aaKnown RBP9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 CLSTN1O94985 981 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 OSBPP22059 807 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 HOXD10P28358 340 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 MECOMQ03112 1051 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 G3BP1Q13283 466 aaKnown RBP eCLIP9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 HABP4Q5JVS0 413 aaKnown RBP9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 SPTY2D1Q68D10 685 aaPredicted RBP9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 GPAT2Q6NUI2 795 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 SLF2Q8IX21 1173 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 SNRKQ9NRH2 765 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 SRRDQ9UH36 339 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 KCNH4Q9UQ05 1017 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 SALL1Q9NSC2 1324 aa9.28□□□□□ -0.92
TM4SF1-201ENST00000305366 PHF20L1A8MW92 1017 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 RAD21O60216 631 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 ENTPD3O75355 529 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 PTPRAP18433 802 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 CCDC173Q0VFZ6 552 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 MOGSQ13724 837 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 ERC1Q8IUD2 1116 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 SCYL3Q8IZE3 742 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 KCTD17Q8N5Z5 321 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 DPF3Q92784 378 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 PPP1R9BQ96SB3 815 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 IDI2Q9BXS1 227 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 HMG20BQ9P0W2 317 aa9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.27□□□□□ -0.92
TM4SF1-201ENST00000305366 MYPNQ86TC9 1320 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 PDE4DIPQ5VU43 2346 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 CXCL11O14625 94 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 GRK4P32298 578 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 PRKCZQ05513 592 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 OS9Q13438 667 aaPredicted RBP9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 NOL9Q5SY16 702 aaKnown RBP9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 FASTKD5Q7L8L6 764 aaKnown RBP9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 PARK7Q99497 189 aaKnown RBP9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 RNF208Q9H0X6 261 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 ZCCHC17Q9NP64 241 aaKnown RBP9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 LRP2BPQ9P2M1 347 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 GABRQQ9UN88 632 aa9.27□□□□□ -0.93
TM4SF1-201ENST00000305366 H0YGN5 161 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 MBD3O95983 291 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 FCGRTP55899 365 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 ZSCAN23Q3MJ62 389 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 CLASRPQ8N2M8 674 aaKnown RBP9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 RGS22Q8NE09 1264 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 SMCR8Q8TEV9 937 aaPredicted RBP9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 LSG1Q9H089 658 aaKnown RBP9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 IL25Q9H293 177 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 AFG3L2Q9Y4W6 797 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 MROH7-TTC4A0A0A0MT08 1334 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 GAKO14976 1311 aa9.26□□□□□ -0.93
TM4SF1-201ENST00000305366 GPR75-ASB3A0A0A6YYF3 556 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 CTNND1O60716 968 aaKnown RBP9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 GNRH1P01148 92 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 CCL5P13501 91 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 ELNP15502 786 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 NASPP49321 788 aaPredicted RBP9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 RHBDL3P58872 404 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 GSTO1P78417 241 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 ANKRD13CQ8N6S4 541 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 ZNF384Q8TF68 577 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 RUFY2Q8WXA3 655 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 GPATCH3Q96I76 525 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 TTC14Q96N46 770 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 RPAP1Q9BWH6 1393 aaPredicted RBP9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 AK9Q5TCS8 1911 aa9.25□□□□□ -0.93
TM4SF1-201ENST00000305366 A0A0G2JLL6 359 aaPredicted RBP9.24□□□□□ -0.93
TM4SF1-201ENST00000305366 ESPNB1AK53 854 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms