RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 PUM3Q15397 648 aaKnown RBP14.32□□□□□ -0.12
COL3A1-201ENST00000304636 ZNF804AQ7Z570 1209 aa14.32□□□□□ -0.12
COL3A1-201ENST00000304636 KLHL7Q8IXQ5 586 aa14.32□□□□□ -0.12
COL3A1-201ENST00000304636 SYCE1Q8N0S2 351 aa14.32□□□□□ -0.12
COL3A1-201ENST00000304636 SF3B2Q13435 895 aaKnown RBP14.31□□□□□ -0.12
COL3A1-201ENST00000304636 RPS6KA1Q15418 735 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 FYB2Q5VWT5 728 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 HAUS4Q9H6D7 363 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 PHLPP2Q6ZVD8 1323 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 BEND3Q5T5X7 828 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 CSRNP2Q9H175 543 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 FANCLQ9NW38 375 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 KCNJ14Q9UNX9 436 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 CAPS2Q9BXY5 557 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 DENND2AQ9ULE3 1009 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 NDUFA8P51970 172 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
COL3A1-201ENST00000304636 MYL10Q9BUA6 226 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
COL3A1-201ENST00000304636 CAPN7Q9Y6W3 813 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 SPOPO43791 374 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 CIB2O75838 187 aa14.31□□□□□ -0.12
COL3A1-201ENST00000304636 CACTINQ8WUQ7 758 aaKnown RBP14.31□□□□□ -0.12
COL3A1-201ENST00000304636 KCNJ18B7U540 433 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 CALUO43852 315 aaPredicted RBP14.3□□□□□ -0.12
COL3A1-201ENST00000304636 CCNT1O60563 726 aaKnown RBP14.3□□□□□ -0.12
COL3A1-201ENST00000304636 KCNJ12Q14500 433 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 SRGAP1Q7Z6B7 1085 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 GDAP1L1Q96MZ0 367 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 PSMB7Q99436 277 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 PDE11AQ9HCR9 933 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL3A1-201ENST00000304636 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 EIF4A1P60842 406 aaKnown RBP14.3□□□□□ -0.12
COL3A1-201ENST00000304636 SFMBT2Q5VUG0 894 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 NOSTRINQ8IVI9 506 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 ASXL2Q76L83 1435 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 ITGA6P23229 1130 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 TSNAXIP1Q2TAA8 658 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 MAP4K1Q92918 833 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 RTEL1Q9NZ71 1219 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 CDC23Q9UJX2 597 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 GCP02774 474 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 HYOU1Q9Y4L1 999 aa14.3□□□□□ -0.12
COL3A1-201ENST00000304636 FLOT1O75955 427 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 MRPL12P52815 198 aaKnown RBP14.29□□□□□ -0.12
COL3A1-201ENST00000304636 KLHL30Q0D2K2 578 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 BCAS4Q8TDM0 211 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 BLZF1Q9H2G9 400 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 IKBKBO14920 756 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 TYW1BQ6NUM6 668 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 CADPS2Q86UW7 1296 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 RASEFQ8IZ41 740 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 SIRT1Q96EB6 747 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 ADCY9O60503 1353 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 MORC3Q14149 939 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 SPATA1Q5VX52 437 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 KIFAP3Q92845 792 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 TRIM31Q9BZY9 425 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 ANKRD2Q9GZV1 360 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 SPTLC3Q9NUV7 552 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
COL3A1-201ENST00000304636 PICALMQ13492 652 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 NEDD9Q14511 834 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 KRT71Q3SY84 523 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 KRT25Q7Z3Z0 450 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 VSIG1Q86XK7 387 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 CCDC110Q8TBZ0 833 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 EAF2Q96CJ1 260 aaPredicted RBP14.28□□□□□ -0.12
COL3A1-201ENST00000304636 LDHBP07195 334 aaKnown RBP14.28□□□□□ -0.12
COL3A1-201ENST00000304636 ATP6V1AP38606 617 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 DNM2P50570 870 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 CTDSPL2Q05D32 466 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 CEP85LQ5SZL2 805 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 FAM89AQ96GI7 184 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
COL3A1-201ENST00000304636 MYCBPQ99417 103 aaPredicted RBP14.28□□□□□ -0.12
COL3A1-201ENST00000304636 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 TCP1P17987 556 aaKnown RBP14.28□□□□□ -0.12
COL3A1-201ENST00000304636 TXKP42681 527 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 APBA1Q02410 837 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 RAB17Q9H0T7 212 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 PPANQ9NQ55 473 aaKnown RBP14.28□□□□□ -0.12
COL3A1-201ENST00000304636 KDRP35968 1356 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 NONOQ15233 471 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL3A1-201ENST00000304636 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 MYO1AQ9UBC5 1043 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 LRWD1Q9UFC0 647 aa14.28□□□□□ -0.12
COL3A1-201ENST00000304636 SAMD9Q5K651 1589 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 IL2RBP14784 551 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 SARNPP82979 210 aaKnown RBP14.27□□□□□ -0.12
COL3A1-201ENST00000304636 SCRN1Q12765 414 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 PEX26Q7Z412 305 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 C2CD5Q86YS7 1000 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 ERCC5P28715 1186 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms