RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
ITGB1-201ENST00000302278 DNAJC18Q9H819 358 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-201ENST00000302278 SLC15A5A6NIM6 579 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 SYN1P17600 705 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 CCND3P30281 292 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 HMGCS2P54868 508 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 SPP2Q13103 211 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 MAP2K5Q13163 448 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 GRB14Q14449 540 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 ZNF512BQ96KM6 892 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 CEP126Q9P2H0 1117 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 ASNSP08243 561 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 ZNF697Q5TEC3 545 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 TRMT2AQ8IZ69 625 aaKnown RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 SEMA6BQ9H3T3 888 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 DDX20Q9UHI6 824 aaKnown RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 LDHCP07864 332 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 CYBAP13498 195 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 PLEKHH3Q7Z736 793 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 DZIP1Q86YF9 867 aaKnown RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 P2RX7Q99572 595 aaKnown RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 CDX2Q99626 313 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 PI4KBQ9UBF8 816 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 HDAC5Q9UQL6 1122 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 RABGAP1Q9Y3P9 1069 aa8.04□□□□□ -1.12
ITGB1-201ENST00000302278 ARIH1Q9Y4X5 557 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-201ENST00000302278 CT47B1P0C2W7 299 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-201ENST00000302278 ADORA1P30542 326 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 MVPQ14764 893 aaKnown RBP8.03□□□□□ -1.12
ITGB1-201ENST00000302278 TATDN1Q6P1N9 297 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 ZEB1P37275 1124 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-201ENST00000302278 JAG1P78504 1218 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 FOXP4Q8IVH2 680 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-201ENST00000302278 EHD4Q9H223 541 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 NRBP1Q9UHY1 535 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 AKAP2Q9Y2D5 859 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 SLURP2P0DP57 97 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 PTPREP23469 700 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 USP17L2Q6R6M4 530 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 TTYH1Q9H313 450 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-201ENST00000302278 EMILIN3Q9NT22 766 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 FLRT1Q9NZU1 646 aa8.03□□□□□ -1.12
ITGB1-201ENST00000302278 MTMR2Q13614 643 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 Q3C1V9 767 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 HMG20BQ9P0W2 317 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 CCL14Q16627 93 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 CCDC84Q86UT8 332 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-201ENST00000302278 CERS3Q8IU89 383 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 SHCBP1Q8NEM2 672 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 MAFAQ8NHW3 353 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-201ENST00000302278 SSH1Q8WYL5 1049 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 PORCNQ9H237 461 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 GPR108Q9NPR9 543 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 TMOD4Q9NZQ9 345 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 PLCG2P16885 1265 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 IRX3P78415 501 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-201ENST00000302278 TRPV1Q8NER1 839 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 ZBTB21Q9ULJ3 1066 aa8.02□□□□□ -1.13
ITGB1-201ENST00000302278 ECM2O94769 699 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-201ENST00000302278 CYP2B6P20813 491 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 RTP1P59025 263 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 SLC39A5Q6ZMH5 540 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 CATSPERGQ6ZRH7 1159 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-201ENST00000302278 ABRAQ8N0Z2 381 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 SPATA5Q8NB90 893 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 XAGE2Q96GT9 111 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 KIAA1683Q9H0B3 1180 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 FLT1P17948 1338 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 A0A1B0GUL7 405 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 MFSD14CQ5VZR4 134 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 PDLIM7Q9NR12 457 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 PHF24Q9UPV7 400 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 KIAA0355O15063 1070 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 GLRX3O76003 335 aaKnown RBP8.01□□□□□ -1.13
ITGB1-201ENST00000302278 PICALMQ13492 652 aa8.01□□□□□ -1.13
ITGB1-201ENST00000302278 PRUNE2Q8WUY3 3088 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 MYH7P12883 1935 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 E9PSI1 815 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 CCNA1P78396 465 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 MDM2Q00987 491 aaPredicted RBP8□□□□□ -1.13
ITGB1-201ENST00000302278 RASIP1Q5U651 963 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 EDC3Q96F86 508 aaKnown RBP8□□□□□ -1.13
ITGB1-201ENST00000302278 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L15C9J2P7 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L13C9JLJ4 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L11C9JVI0 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L18D6R9N7 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L22D6RA61 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L17D6RBQ6 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L19D6RCP7 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L20D6RJB6 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 UBTFL1P0CB47 393 aaPredicted RBP8□□□□□ -1.13
ITGB1-201ENST00000302278 USP17L24Q0WX57 530 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 SHHQ15465 462 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 SH3RF3Q8TEJ3 882 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms