RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 RCOR1Q9UKL0 485 aa25.92■■□□□ 1.74
SMAD1-201ENST00000302085 KIF28PB7ZC32 967 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 C21orf2O43822 256 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 GUCY1A2P33402 732 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 KIF23Q02241 960 aaPredicted RBP25.91■■□□□ 1.74
SMAD1-201ENST00000302085 USP28Q96RU2 1077 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 IL17RBQ9NRM6 502 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 CEBPZQ03701 1054 aaKnown RBP25.91■■□□□ 1.74
SMAD1-201ENST00000302085 AOC3Q16853 763 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 STRIP1Q5VSL9 837 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 HHIPL2Q6UWX4 724 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 CCDC82Q8N4S0 544 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 PGBD1Q96JS3 809 aa25.91■■□□□ 1.74
SMAD1-201ENST00000302085 DDAH1O94760 285 aa25.9■■□□□ 1.74
SMAD1-201ENST00000302085 TRIM22Q8IYM9 498 aa25.9■■□□□ 1.74
SMAD1-201ENST00000302085 ECM29Q5VYK3 1845 aa25.9■■□□□ 1.74
SMAD1-201ENST00000302085 DDX60LQ5H9U9 1706 aaKnown RBP25.9■■□□□ 1.74
SMAD1-201ENST00000302085 CALM1P0DP23 149 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 CALM2P0DP24 149 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 CALM3P0DP25 149 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 KCNA3P22001 575 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 KIAA2012Q0VF49 1180 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 DACT2Q5SW24 774 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 TTLL6Q8N841 843 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 WASF1Q92558 559 aa25.89■■□□□ 1.74
SMAD1-201ENST00000302085 RASA1P20936 1047 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 CDK8P49336 464 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 FKBP1AP62942 108 aaKnown RBP25.89■■□□□ 1.73
SMAD1-201ENST00000302085 FUT2Q10981 343 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 CCDC183Q5T5S1 534 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 LRSAM1Q6UWE0 723 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 C16orf86Q6ZW13 317 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 BRAPQ7Z569 592 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 ZNF444Q8N0Y2 327 aaPredicted RBP25.89■■□□□ 1.73
SMAD1-201ENST00000302085 ANKS1AQ92625 1134 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 USP40Q9NVE5 1235 aa25.89■■□□□ 1.73
SMAD1-201ENST00000302085 DPEP1P16444 411 aa25.88■■□□□ 1.73
SMAD1-201ENST00000302085 APOBEC3HQ6NTF7 200 aaKnown RBP25.88■■□□□ 1.73
SMAD1-201ENST00000302085 DGKHQ86XP1 1220 aa25.88■■□□□ 1.73
SMAD1-201ENST00000302085 SUPT20HQ8NEM7 779 aa25.88■■□□□ 1.73
SMAD1-201ENST00000302085 TCP11L1Q9NUJ3 509 aa25.88■■□□□ 1.73
SMAD1-201ENST00000302085 SCN9AQ15858 1988 aa25.88■■□□□ 1.73
SMAD1-201ENST00000302085 WDHD1O75717 1129 aaPredicted RBP25.87■■□□□ 1.73
SMAD1-201ENST00000302085 TEKT1Q969V4 418 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 RBM28Q9NW13 759 aaKnown RBP25.87■■□□□ 1.73
SMAD1-201ENST00000302085 TAOK2Q9UL54 1235 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 MYH1P12882 1939 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 USP17L3A6NCW0 530 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 USP17L4A6NCW7 530 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 DEXIO95424 95 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 CDC42EP5Q6NZY7 148 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 USP17L1Q7RTZ2 530 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 CCDC125Q86Z20 511 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 MRIQ9BWK5 157 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 DDX4Q9NQI0 724 aaKnown RBP25.87■■□□□ 1.73
SMAD1-201ENST00000302085 FOCADQ5VW36 1801 aa25.87■■□□□ 1.73
SMAD1-201ENST00000302085 GOLGA6L4A6NEF3 574 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 PLEKHA8P1O95397 391 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 LIG1P18858 919 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 PICALMQ13492 652 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 TRIM29Q14134 588 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 MYSM1Q5VVJ2 828 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 ZNF287Q9HBT7 754 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 RTEL1Q9NZ71 1219 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 TSPY3P0CV98 308 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 TSPY8P0CW00 308 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 CRKP46108 304 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 KIAA0825Q8IV33 1275 aa25.86■■□□□ 1.73
SMAD1-201ENST00000302085 RNF26Q9BY78 433 aaPredicted RBP25.86■■□□□ 1.73
SMAD1-201ENST00000302085 CCDC178Q5BJE1 867 aa25.85■■□□□ 1.73
SMAD1-201ENST00000302085 ADAMTSL1Q8N6G6 1762 aa25.85■■□□□ 1.73
SMAD1-201ENST00000302085 TMTC3Q6ZXV5 915 aa25.84■■□□□ 1.73
SMAD1-201ENST00000302085 ZDHHC15Q96MV8 337 aa25.84■■□□□ 1.73
SMAD1-201ENST00000302085 PANK2Q9BZ23 570 aa25.84■■□□□ 1.73
SMAD1-201ENST00000302085 PRPF3O43395 683 aaKnown RBP25.84■■□□□ 1.73
SMAD1-201ENST00000302085 U2AF2P26368 475 aaKnown RBP eCLIP25.84■■□□□ 1.734e-6■■■■■ 27.7
SMAD1-201ENST00000302085 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.84■■□□□ 1.73
SMAD1-201ENST00000302085 RBSNQ9H1K0 784 aa25.84■■□□□ 1.73
SMAD1-201ENST00000302085 KAT14Q9H8E8 782 aa25.84■■□□□ 1.73
SMAD1-201ENST00000302085 CLIC4Q9Y696 253 aa25.84■■□□□ 1.73
SMAD1-201ENST00000302085 ZNF646O15015 1829 aaPredicted RBP25.83■■□□□ 1.73
SMAD1-201ENST00000302085 PPIP5K2O43314 1243 aa25.83■■□□□ 1.73
SMAD1-201ENST00000302085 PKN1Q16512 942 aa25.83■■□□□ 1.73
SMAD1-201ENST00000302085 GRIPAP1Q4V328 841 aa25.83■■□□□ 1.73
SMAD1-201ENST00000302085 CCDC93Q567U6 631 aa25.83■■□□□ 1.73
SMAD1-201ENST00000302085 CTCFLQ8NI51 663 aaPredicted RBP25.83■■□□□ 1.73
SMAD1-201ENST00000302085 PCDHAC2Q9Y5I4 1007 aa25.83■■□□□ 1.73
SMAD1-201ENST00000302085 V9GY48 417 aaPredicted RBP25.83■■□□□ 1.73
SMAD1-201ENST00000302085 YDJCA8MPS7 323 aa25.82■■□□□ 1.72
SMAD1-201ENST00000302085 ZBTB7AO95365 584 aa25.82■■□□□ 1.72
SMAD1-201ENST00000302085 RTKN2Q8IZC4 609 aa25.82■■□□□ 1.72
SMAD1-201ENST00000302085 SRBD1Q8N5C6 995 aaKnown RBP25.82■■□□□ 1.72
SMAD1-201ENST00000302085 KCNJ14Q9UNX9 436 aa25.82■■□□□ 1.72
SMAD1-201ENST00000302085 LETM1O95202 739 aaPredicted RBP25.82■■□□□ 1.72
SMAD1-201ENST00000302085 MMP1P03956 469 aa25.82■■□□□ 1.72
SMAD1-201ENST00000302085 HDLBPQ00341 1268 aaKnown RBP25.82■■□□□ 1.72
SMAD1-201ENST00000302085 NEDD1Q8NHV4 660 aa25.82■■□□□ 1.72
SMAD1-201ENST00000302085 GABPAQ06546 454 aa25.81■■□□□ 1.72
SMAD1-201ENST00000302085 LINC00301Q8NCQ3 95 aa25.81■■□□□ 1.72
SMAD1-201ENST00000302085 POLR3EQ9NVU0 708 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms