RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 MEIS3Q99687 375 aa12.61□□□□□ -0.39
RPSA-201ENST00000301821 LDHCP07864 332 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 XRCC5P13010 732 aaKnown RBP12.6□□□□□ -0.39
RPSA-201ENST00000301821 RGS2P41220 211 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 GSTO1P78417 241 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
RPSA-201ENST00000301821 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
RPSA-201ENST00000301821 APBA2Q99767 749 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
RPSA-201ENST00000301821 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
RPSA-201ENST00000301821 COPRSQ9NQ92 184 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
RPSA-201ENST00000301821 HERC5Q9UII4 1024 aaKnown RBP12.6□□□□□ -0.39
RPSA-201ENST00000301821 GDF11O95390 407 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
RPSA-201ENST00000301821 MAPK4P31152 587 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 BACE1P56817 501 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 TFCP2Q12800 502 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 SHROOM1Q2M3G4 852 aaPredicted RBP12.59□□□□□ -0.39
RPSA-201ENST00000301821 ZNF697Q5TEC3 545 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 LHX8Q68G74 356 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 GPR142Q7Z601 462 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 NSUN4Q96CB9 384 aaKnown RBP12.59□□□□□ -0.39
RPSA-201ENST00000301821 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 WDR18Q9BV38 432 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
RPSA-201ENST00000301821 PORCNQ9H237 461 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 HMG20BQ9P0W2 317 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 COL6A3P12111 3177 aa12.59□□□□□ -0.39
RPSA-201ENST00000301821 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 MAP4K4O95819 1239 aaPredicted RBP12.58□□□□□ -0.4
RPSA-201ENST00000301821 ASNSP08243 561 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 HOXA7P31268 230 aaPredicted RBP12.58□□□□□ -0.4
RPSA-201ENST00000301821 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
RPSA-201ENST00000301821 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 ERVK-24P63145 666 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 JAG1P78504 1218 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 Q3C1V9 767 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 PLEKHH3Q7Z736 793 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 SH3RF3Q8TEJ3 882 aaPredicted RBP12.58□□□□□ -0.4
RPSA-201ENST00000301821 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
RPSA-201ENST00000301821 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 SENP6Q9GZR1 1112 aaPredicted RBP12.58□□□□□ -0.4
RPSA-201ENST00000301821 RBPJLQ9UBG7 517 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 AKAP2Q9Y2D5 859 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 LAMA3Q16787 3333 aa12.58□□□□□ -0.4
RPSA-201ENST00000301821 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 BCAR3O75815 825 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 MORN1Q5T089 497 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 WDR78Q5VTH9 848 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
RPSA-201ENST00000301821 MIER1Q8N108 512 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 CRACR2BQ8N4Y2 399 aaPredicted RBP12.57□□□□□ -0.4
RPSA-201ENST00000301821 USP6NLQ92738 828 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 DNAJC18Q9H819 358 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 PI4KBQ9UBF8 816 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 NDUFB9Q9Y6M9 179 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.57□□□□□ -0.4
RPSA-201ENST00000301821 LTBP2Q14767 1821 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 CUL9Q8IWT3 2517 aa12.57□□□□□ -0.4
RPSA-201ENST00000301821 USP17L10C9JJH3 530 aa12.56□□□□□ -0.4
RPSA-201ENST00000301821 MAP2K5Q13163 448 aa12.56□□□□□ -0.4
RPSA-201ENST00000301821 MAPKAPK5Q8IW41 473 aa12.56□□□□□ -0.4
RPSA-201ENST00000301821 GTF3C2Q8WUA4 911 aaPredicted RBP12.56□□□□□ -0.4
RPSA-201ENST00000301821 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
RPSA-201ENST00000301821 DHX36Q9H2U1 1008 aaKnown RBP12.56□□□□□ -0.4
RPSA-201ENST00000301821 AATFQ9NY61 560 aaKnown RBP eCLIP12.56□□□□□ -0.4not detected■■□□□ 12.9
RPSA-201ENST00000301821 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
RPSA-201ENST00000301821 PRKAG2Q9UGJ0 569 aa12.56□□□□□ -0.4
RPSA-201ENST00000301821 ZBTB21Q9ULJ3 1066 aa12.56□□□□□ -0.4
RPSA-201ENST00000301821 HDAC5Q9UQL6 1122 aa12.56□□□□□ -0.4
RPSA-201ENST00000301821 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 SRGAP3O43295 1099 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 CNGA1P29973 690 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 ZYXQ15942 572 aaKnown RBP12.55□□□□□ -0.4
RPSA-201ENST00000301821 MFSD14CQ5VZR4 134 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 POTEEQ6S8J3 1075 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 CLUAP1Q96AJ1 413 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 DDX20Q9UHI6 824 aaKnown RBP12.55□□□□□ -0.4
RPSA-201ENST00000301821 FLT1P17948 1338 aa12.55□□□□□ -0.4
RPSA-201ENST00000301821 FOCADQ5VW36 1801 aa12.54□□□□□ -0.4
RPSA-201ENST00000301821 BAG3O95817 575 aa12.54□□□□□ -0.4
RPSA-201ENST00000301821 TRIM27P14373 513 aa12.54□□□□□ -0.4
RPSA-201ENST00000301821 ARID4AP29374 1257 aaPredicted RBP12.54□□□□□ -0.4
RPSA-201ENST00000301821 MCAMP43121 646 aa12.54□□□□□ -0.4
RPSA-201ENST00000301821 RTP1P59025 263 aa12.54□□□□□ -0.4
RPSA-201ENST00000301821 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPSA-201ENST00000301821 NAA16Q6N069 864 aaPredicted RBP12.54□□□□□ -0.4
RPSA-201ENST00000301821 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
RPSA-201ENST00000301821 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
RPSA-201ENST00000301821 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
RPSA-201ENST00000301821 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
RPSA-201ENST00000301821 FEZ1Q99689 392 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms