RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
CHAF1A-201ENST00000301280 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
CHAF1A-201ENST00000301280 ZMYM6O95789 1325 aa17.91■□□□□ 0.46
CHAF1A-201ENST00000301280 MROH5Q6ZUA9 1318 aa17.91■□□□□ 0.46
CHAF1A-201ENST00000301280 USP17L8P0C7I0 530 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 ZNF652Q9Y2D9 606 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 JMYQ8N9B5 988 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 TDRD7Q8NHU6 1098 aaKnown RBP17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 MKNK2Q9HBH9 465 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 PRR29P0C7W0 189 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 NLRP5P59047 1200 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 CEP135Q66GS9 1140 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 LRRC8AQ8IWT6 810 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 FANCBQ8NB91 859 aa17.9■□□□□ 0.46
CHAF1A-201ENST00000301280 CTAGE5O15320 804 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 CAVIN2O95810 425 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 SYT10Q6XYQ8 523 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 IQCA1Q86XH1 822 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 FAM170AA1A519 330 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 TPM3P06753 285 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 ADKP55263 362 aaKnown RBP17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 PIK3AP1Q6ZUJ8 805 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 PDCL2Q8N4E4 241 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 LINC00116Q8NCU8 138 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 ENGASEQ8NFI3 743 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 ESR2Q92731 530 aa17.89■□□□□ 0.45
CHAF1A-201ENST00000301280 PICALMQ13492 652 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 MAPKAPK5Q8IW41 473 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 KIAA1551Q9HCM1 1747 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 FANCCQ00597 558 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 CATIPQ7Z7H3 387 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 PLA2G4DQ86XP0 818 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 KRT23Q9C075 422 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 RPS8P62241 208 aaKnown RBP17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 BRAPQ7Z569 592 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 ANKRD7Q92527 254 aa17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 CCNL1Q9UK58 526 aaPredicted RBP17.88■□□□□ 0.45
CHAF1A-201ENST00000301280 NID2Q14112 1375 aa17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 RFC4P35249 363 aa17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 SLC39A14Q15043 492 aa17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 EARS2Q5JPH6 523 aaKnown RBP17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 NOSTRINQ8IVI9 506 aa17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 MINPP1Q9UNW1 487 aa17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 CTIFO43310 598 aaKnown RBP17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 DESI2Q9BSY9 194 aa17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 FAM217BQ9NTX9 383 aaPredicted RBP17.87■□□□□ 0.45
CHAF1A-201ENST00000301280 CDC25BP30305 580 aa17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 KARSQ15046 597 aaKnown RBP17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 AMIGO3Q86WK7 504 aa17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 SLURP2P0DP57 97 aa17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 HIBADHP31937 336 aaKnown RBP17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 KRI1Q8N9T8 703 aaKnown RBP17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 CTCFLQ8NI51 663 aaPredicted RBP17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 DNAI1Q9UI46 699 aa17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 BCL9LQ86UU0 1499 aa17.86■□□□□ 0.45
CHAF1A-201ENST00000301280 SCN7AQ01118 1682 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 USP17L3A6NCW0 530 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 USP17L4A6NCW7 530 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 NRDCO43847 1150 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 TOP1P11387 765 aaKnown RBP17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 CCT6AP40227 531 aaKnown RBP17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 PDE4BQ07343 736 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 AXDND1Q5T1B0 1012 aaPredicted RBP17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 USP17L1Q7RTZ2 530 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 TGFBRAP1Q8WUH2 860 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 FAM84BQ96KN1 310 aaPredicted RBP17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 TCRBV5S4A2TA0A5A2 114 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 NTSR2O95665 410 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 MECOMQ03112 1051 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 SARM1Q6SZW1 724 aa17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 MYH14Q7Z406 1995 aaKnown RBP17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 URI1O94763 535 aaPredicted RBP17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 SAMSN1Q9NSI8 373 aaKnown RBP17.85■□□□□ 0.45
CHAF1A-201ENST00000301280 WNT7AO00755 349 aa17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 FOXP4Q8IVH2 680 aaPredicted RBP17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 NFE2L3Q9Y4A8 694 aa17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 YEATS4O95619 227 aa17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 NCBP1Q09161 790 aaKnown RBP17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 NFIXQ14938 502 aa17.84■□□□□ 0.45
CHAF1A-201ENST00000301280 G3V3G9 751 aa17.83■□□□□ 0.45
CHAF1A-201ENST00000301280 TFAP4Q01664 338 aa17.83■□□□□ 0.45
CHAF1A-201ENST00000301280 DCAF8Q5TAQ9 597 aa17.83■□□□□ 0.45
CHAF1A-201ENST00000301280 SMARCE1Q969G3 411 aa17.83■□□□□ 0.45
CHAF1A-201ENST00000301280 EPC1Q9H2F5 836 aa17.83■□□□□ 0.45
CHAF1A-201ENST00000301280 CNNM2Q9H8M5 875 aa17.83■□□□□ 0.45
CHAF1A-201ENST00000301280 CMA1P23946 247 aa17.83■□□□□ 0.44
CHAF1A-201ENST00000301280 ARID4AP29374 1257 aaPredicted RBP17.83■□□□□ 0.44
CHAF1A-201ENST00000301280 AK7Q96M32 723 aa17.83■□□□□ 0.44
CHAF1A-201ENST00000301280 RNF41Q9H4P4 317 aaPredicted RBP17.83■□□□□ 0.44
CHAF1A-201ENST00000301280 ZNF215Q9UL58 517 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms