RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CHADLQ6NUI6 762 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 MOB2Q70IA6 237 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.9■□□□□ 0.46
CCDC140-201ENST00000295226 SWAP70Q9UH65 585 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 HERC5Q9UII4 1024 aaKnown RBP17.9■□□□□ 0.46
CCDC140-201ENST00000295226 TBC1D12O60347 775 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 MAP3K10Q02779 954 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 CERKLQ49MI3 558 aaPredicted RBP17.89■□□□□ 0.45
CCDC140-201ENST00000295226 TATDN1Q6P1N9 297 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 IL17RAQ96F46 866 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 KRT23Q9C075 422 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 ZSWIM6Q9HCJ5 1215 aa17.89■□□□□ 0.45
CCDC140-201ENST00000295226 GPHNQ9NQX3 736 aaPredicted RBP17.89■□□□□ 0.45
CCDC140-201ENST00000295226 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.89■□□□□ 0.45
CCDC140-201ENST00000295226 TSPY2A6NKD2 308 aa17.88■□□□□ 0.45
CCDC140-201ENST00000295226 PHF20L1A8MW92 1017 aa17.88■□□□□ 0.45
CCDC140-201ENST00000295226 MPHOSPH10O00566 681 aaKnown RBP17.88■□□□□ 0.45
CCDC140-201ENST00000295226 PSMA5P28066 241 aa17.88■□□□□ 0.45
CCDC140-201ENST00000295226 ESR2Q92731 530 aa17.88■□□□□ 0.45
CCDC140-201ENST00000295226 LARP6Q9BRS8 491 aaKnown RBP17.88■□□□□ 0.45
CCDC140-201ENST00000295226 MYH8P13535 1937 aa17.88■□□□□ 0.45
CCDC140-201ENST00000295226 PRC1O43663 620 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 USP2O75604 605 aaPredicted RBP17.87■□□□□ 0.45
CCDC140-201ENST00000295226 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
CCDC140-201ENST00000295226 RPS6KB1P23443 525 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 INPP5BP32019 993 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 NEK4P51957 841 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 RUFY3Q7L099 469 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
CCDC140-201ENST00000295226 CLEC10AQ8IUN9 316 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 TM6SF1Q9BZW5 370 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 ZNF287Q9HBT7 754 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 CYP46A1Q9Y6A2 500 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 TSPY3P0CV98 308 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 TSPY8P0CW00 308 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 PCP11498 1178 aaKnown RBP17.87■□□□□ 0.45
CCDC140-201ENST00000295226 EXOSC10Q01780 885 aaKnown RBP17.87■□□□□ 0.45
CCDC140-201ENST00000295226 DCAF15Q66K64 600 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 ZKSCAN4Q969J2 545 aaPredicted RBP17.87■□□□□ 0.45
CCDC140-201ENST00000295226 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC140-201ENST00000295226 ZNF341Q9BYN7 854 aa17.87■□□□□ 0.45
CCDC140-201ENST00000295226 GH2P01242 217 aa17.86■□□□□ 0.45
CCDC140-201ENST00000295226 MCM5P33992 734 aa17.86■□□□□ 0.45
CCDC140-201ENST00000295226 TTLL12Q14166 644 aaPredicted RBP17.86■□□□□ 0.45
CCDC140-201ENST00000295226 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
CCDC140-201ENST00000295226 WRNIP1Q96S55 665 aa17.86■□□□□ 0.45
CCDC140-201ENST00000295226 SENP2Q9HC62 589 aa17.86■□□□□ 0.45
CCDC140-201ENST00000295226 IL17RBQ9NRM6 502 aa17.86■□□□□ 0.45
CCDC140-201ENST00000295226 ANGEL1Q9UNK9 670 aaKnown RBP17.86■□□□□ 0.45
CCDC140-201ENST00000295226 NF2P35240 595 aa17.85■□□□□ 0.45
CCDC140-201ENST00000295226 ABCB5Q2M3G0 1257 aa17.85■□□□□ 0.45
CCDC140-201ENST00000295226 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
CCDC140-201ENST00000295226 KLRG1Q96E93 195 aa17.85■□□□□ 0.45
CCDC140-201ENST00000295226 HOOK2Q96ED9 719 aa17.85■□□□□ 0.45
CCDC140-201ENST00000295226 PDRG1Q9NUG6 133 aa17.85■□□□□ 0.45
CCDC140-201ENST00000295226 CELF2O95319 508 aaKnown RBP17.84■□□□□ 0.45
CCDC140-201ENST00000295226 HMGB1P09429 215 aaKnown RBP17.84■□□□□ 0.45
CCDC140-201ENST00000295226 GUCY1A2P33402 732 aa17.84■□□□□ 0.45
CCDC140-201ENST00000295226 CAP2P40123 477 aa17.84■□□□□ 0.45
CCDC140-201ENST00000295226 SEPT2Q15019 361 aa17.84■□□□□ 0.45
CCDC140-201ENST00000295226 RABEP1Q15276 862 aa17.84■□□□□ 0.45
CCDC140-201ENST00000295226 Q6ZUG5 572 aa17.84■□□□□ 0.45
CCDC140-201ENST00000295226 NEDD1Q8NHV4 660 aa17.84■□□□□ 0.45
CCDC140-201ENST00000295226 ZNF112Q9UJU3 913 aa17.84■□□□□ 0.45
CCDC140-201ENST00000295226 UBE2Q2LH0YL09 131 aa17.83■□□□□ 0.45
CCDC140-201ENST00000295226 IFIT3O14879 490 aaKnown RBP17.83■□□□□ 0.45
CCDC140-201ENST00000295226 PPP1R12BO60237 982 aaPredicted RBP17.83■□□□□ 0.45
CCDC140-201ENST00000295226 CD2BP2O95400 341 aaKnown RBP17.83■□□□□ 0.45
CCDC140-201ENST00000295226 RAB3GAP1Q15042 981 aa17.83■□□□□ 0.45
CCDC140-201ENST00000295226 IGDCC4Q8TDY8 1250 aa17.83■□□□□ 0.45
CCDC140-201ENST00000295226 CEP95Q96GE4 821 aa17.83■□□□□ 0.45
CCDC140-201ENST00000295226 CCDC17Q96LX7 622 aa17.83■□□□□ 0.45
CCDC140-201ENST00000295226 TMEM67Q5HYA8 995 aa17.83■□□□□ 0.44
CCDC140-201ENST00000295226 CST9Q5W186 159 aa17.83■□□□□ 0.44
CCDC140-201ENST00000295226 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.44
CCDC140-201ENST00000295226 TTC14Q96N46 770 aa17.83■□□□□ 0.44
CCDC140-201ENST00000295226 ZSCAN10Q96SZ4 725 aaPredicted RBP17.83■□□□□ 0.44
CCDC140-201ENST00000295226 UBAC1Q9BSL1 405 aa17.83■□□□□ 0.44
CCDC140-201ENST00000295226 TNKSO95271 1327 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 AK2P54819 239 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 FGD1P98174 961 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 ATP2B2Q01814 1243 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 BECN1Q14457 450 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 ENAHQ8N8S7 591 aaPredicted RBP17.82■□□□□ 0.44
CCDC140-201ENST00000295226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC140-201ENST00000295226 CABP5Q9NP86 173 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 ZBTB21Q9ULJ3 1066 aa17.82■□□□□ 0.44
CCDC140-201ENST00000295226 IGKV6D-41A0A0C4DH26 115 aa17.81■□□□□ 0.44
CCDC140-201ENST00000295226 CTNND1O60716 968 aaKnown RBP17.81■□□□□ 0.44
CCDC140-201ENST00000295226 TOMM70O94826 608 aa17.81■□□□□ 0.44
CCDC140-201ENST00000295226 MAP3K9P80192 1104 aa17.81■□□□□ 0.44
CCDC140-201ENST00000295226 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
CCDC140-201ENST00000295226 SEC23AQ15436 765 aa17.81■□□□□ 0.44
CCDC140-201ENST00000295226 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.81■□□□□ 0.44
CCDC140-201ENST00000295226 SMC1BQ8NDV3 1235 aa17.81■□□□□ 0.44
CCDC140-201ENST00000295226 CLMNQ96JQ2 1002 aa17.81■□□□□ 0.44
CCDC140-201ENST00000295226 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms