RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 NOSTRINQ8IVI9 506 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 TFR2Q9UP52 801 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 PCDHB6Q9Y5E3 794 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 FOXP2O15409 715 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 RPS6KA5O75582 802 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 ERLIN2O94905 339 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 NR5A1Q13285 461 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 MAP9Q49MG5 647 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 TBC1D10CQ8IV04 446 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 TAB2Q9NYJ8 693 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 CTNND2Q9UQB3 1225 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 RANBP6O60518 1105 aaKnown RBP11.62□□□□□ -0.55
LMX1A-201ENST00000294816 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
LMX1A-201ENST00000294816 SPATA1Q5VX52 437 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 RAPGEF4Q8WZA2 1011 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 APPBP2Q92624 585 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 ZBTB3Q9H5J0 574 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 NLRP2Q9NX02 1062 aa11.62□□□□□ -0.55
LMX1A-201ENST00000294816 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 IFIT3O14879 490 aaKnown RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 GYPCP04921 128 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 GUCY1A2P33402 732 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 KRT9P35527 623 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 GGCXP38435 758 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 FAM76AQ8TAV0 307 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 CSRNP2Q9H175 543 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 SLC12A7Q9Y666 1083 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 PLEKHG1Q9ULL1 1385 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 UBN2Q6ZU65 1347 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 A0A087WUV0 522 aaPredicted RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 EBAG9O00559 213 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 SYF2O95926 243 aaKnown RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 SNRPA1P09661 255 aaKnown RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 ERVK-24P63145 666 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 TUBB4BP68371 445 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 FKBP15Q5T1M5 1219 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 TMTC1Q8IUR5 882 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 KCNH5Q8NCM2 988 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 NUP133Q8WUM0 1156 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 XAGE2Q96GT9 111 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 NCAPGQ9BPX3 1015 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 ZKSCAN3Q9BRR0 538 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 EHD4Q9H223 541 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 GEMIN8Q9NWZ8 242 aaKnown RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 FBXO2Q9UK22 296 aaPredicted RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 DIP2AQ14689 1571 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 SH2B2O14492 632 aaPredicted RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 FOXO4P98177 505 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 MMS22LQ6ZRQ5 1243 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 CABP5Q9NP86 173 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
LMX1A-201ENST00000294816 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 MAPK8IP1Q9UQF2 711 aa11.61□□□□□ -0.55
LMX1A-201ENST00000294816 MRC1P22897 1456 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 FAM237AA0A1B0GTK4 181 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 GOLGA6CA6NDK9 693 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 ZFYP08048 801 aaPredicted RBP11.6□□□□□ -0.55
LMX1A-201ENST00000294816 GOLGA6DP0CG33 693 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 PTPREP23469 700 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 ERCC5P28715 1186 aaPredicted RBP11.6□□□□□ -0.55
LMX1A-201ENST00000294816 EIF5P55010 431 aaKnown RBP11.6□□□□□ -0.55
LMX1A-201ENST00000294816 CYP26C1Q6V0L0 522 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 CTAGE1Q96RT6 745 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 MMS19Q96T76 1030 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 GOLGA6AQ9NYA3 693 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 SAMM50Q9Y512 469 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
LMX1A-201ENST00000294816 TUBBP07437 444 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 TOB1P50616 345 aaPredicted RBP11.6□□□□□ -0.55
LMX1A-201ENST00000294816 MRPS25P82663 173 aaKnown RBP11.6□□□□□ -0.55
LMX1A-201ENST00000294816 FBXW10Q5XX13 1052 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 KANK3Q6NY19 840 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 KIAA1328Q86T90 577 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 FBXL16Q8N461 479 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 EPSTI1Q96J88 318 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 CHP1Q99653 195 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 SLC52A2Q9HAB3 445 aa11.6□□□□□ -0.55
LMX1A-201ENST00000294816 CWC25Q9NXE8 425 aaPredicted RBP11.6□□□□□ -0.55
LMX1A-201ENST00000294816 H0YHG0 523 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 USP14P54578 494 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 RRAGBQ5VZM2 374 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 MCTP2Q6DN12 878 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 TRIML1Q8N9V2 468 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 BCAS4Q8TDM0 211 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 BLZF1Q9H2G9 400 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 CPDO75976 1380 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 RNF225M0QZC1 329 aaPredicted RBP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 IBSPP21815 317 aaPredicted RBP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 SARSP49591 514 aaKnown RBP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 TSR1Q2NL82 804 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms