RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 MTMR10Q9NXD2 777 aa13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 TMOD4Q9NZQ9 345 aa13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 HERC5Q9UII4 1024 aaKnown RBP13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 STXBP5LQ9Y2K9 1186 aa13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 UNC80Q8N2C7 3258 aa13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 ZKSCAN1P17029 563 aaPredicted RBP13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 BACE1P56817 501 aa13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 HERVK_113P62684 666 aa13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 CACNB2Q08289 660 aaPredicted RBP13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 GPRC5AQ8NFJ5 357 aa13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 WDR18Q9BV38 432 aa13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 DNAJC18Q9H819 358 aa13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 PI4KBQ9UBF8 816 aa13.24□□□□□ -0.29
NSMCE2-201ENST00000287437 SIPA1L1O43166 1804 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 ASNSP08243 561 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 COL6A1P12109 1028 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 XRCC5P13010 732 aaKnown RBP13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 ARID4AP29374 1257 aaPredicted RBP13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 HOXA7P31268 230 aaPredicted RBP13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 MCAMP43121 646 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 CCL14Q16627 93 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 LRRC26Q2I0M4 334 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 PORCNQ9H237 461 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 AATFQ9NY61 560 aaKnown RBP eCLIP13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 LRP2BPQ9P2M1 347 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
NSMCE2-201ENST00000287437 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 GDF11O95390 407 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 MAPK4P31152 587 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 ERVK-9P63128 1117 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 ERVK-24P63145 666 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 MTX1Q13505 466 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 Q3C1V9 767 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 LHX8Q68G74 356 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 USP6NLQ92738 828 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 NOL10Q9BSC4 688 aaKnown RBP13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 PAGR1Q9BTK6 254 aa13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 DHX36Q9H2U1 1008 aaKnown RBP13.22□□□□□ -0.29
NSMCE2-201ENST00000287437 FLT1P17948 1338 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 C19orf81C9J6K1 198 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 RGS2P41220 211 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 MORN1Q5T089 497 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 NAA16Q6N069 864 aaPredicted RBP13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 POTEEQ6S8J3 1075 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 GPR142Q7Z601 462 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 ADGRA1Q86SQ6 560 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 TRMT44Q8IYL2 757 aaKnown RBP13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 APBA2Q99767 749 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 SNRKQ9NRH2 765 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
NSMCE2-201ENST00000287437 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 BAG3O95817 575 aa13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 GNAI3P08754 354 aa13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 ZBTB21Q9ULJ3 1066 aa13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
NSMCE2-201ENST00000287437 LAMA2P24043 3122 aaKnown RBP13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 UQCRFS1P1P0C7P4 283 aa13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 PLCG2P16885 1265 aa13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
NSMCE2-201ENST00000287437 DNAH12Q6ZR08 3092 aa13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 PPP4CP60510 307 aa13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 GTF3C2Q8WUA4 911 aaPredicted RBP13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 FAM161BQ96MY7 647 aa13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 COL25A1Q9BXS0 654 aaPredicted RBP13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
NSMCE2-201ENST00000287437 CNMDO75829 334 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 GH2P01242 217 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L2Q6R6M4 530 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 EDC3Q96F86 508 aaKnown RBP13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 FEZ1Q99689 392 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 GINM1Q9NU53 330 aa13.17□□□□□ -0.3
NSMCE2-201ENST00000287437 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms