RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 FANCBQ8NB91 859 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 TEKT1Q969V4 418 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 ALG1Q9BT22 464 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 TDRD3Q9H7E2 651 aaKnown RBP12.8□□□□□ -0.36
GGPS1-201ENST00000282841 C10orf71Q711Q0 1435 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 RRP9O43818 475 aaKnown RBP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 TSPY3P0CV98 308 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 TSPY8P0CW00 308 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 HMGN5P82970 282 aaKnown RBP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 GAKO14976 1311 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 GOLGA8HP0CJ92 632 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 CDK8P49336 464 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 RCSD1Q6JBY9 416 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 NLGN2Q8NFZ4 835 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 WDR19Q8NEZ3 1342 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 CLRN2A0PK11 232 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 SLC3A2P08195 630 aaKnown RBP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 POLD1P28340 1107 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 SBK1Q52WX2 424 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
GGPS1-201ENST00000282841 ZSCAN29Q8IWY8 852 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-201ENST00000282841 COL4A5P29400 1685 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 PSMD14O00487 310 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 RASA1P20936 1047 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 PRMT6Q96LA8 375 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-201ENST00000282841 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 SYCE3A1L190 88 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 AMOTL1Q8IY63 956 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-201ENST00000282841 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
GGPS1-201ENST00000282841 FGRP09769 529 aa12.77□□□□□ -0.36
GGPS1-201ENST00000282841 CATIPQ7Z7H3 387 aa12.77□□□□□ -0.36
GGPS1-201ENST00000282841 SLF2Q8IX21 1173 aa12.77□□□□□ -0.36
GGPS1-201ENST00000282841 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.36
GGPS1-201ENST00000282841 USP28Q96RU2 1077 aa12.77□□□□□ -0.36
GGPS1-201ENST00000282841 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.36
GGPS1-201ENST00000282841 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 ORC4O43929 436 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 RAD21O60216 631 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 ATP2B1P20020 1258 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 KRT85P78386 507 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 SSRP1Q08945 709 aaKnown RBP12.77□□□□□ -0.37
GGPS1-201ENST00000282841 TROAPQ12815 778 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 ZSCAN23Q3MJ62 389 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 KRT40Q6A162 431 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 FBXO18Q8NFZ0 1043 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 SPATA32Q96LK8 384 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.37
GGPS1-201ENST00000282841 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
GGPS1-201ENST00000282841 DDTLA6NHG4 134 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-201ENST00000282841 RASSF7Q02833 373 aa12.76□□□□□ -0.37
GGPS1-201ENST00000282841 SKOR2Q2VWA4 1001 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-201ENST00000282841 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
GGPS1-201ENST00000282841 SHISA4Q96DD7 197 aa12.76□□□□□ -0.37
GGPS1-201ENST00000282841 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
GGPS1-201ENST00000282841 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
GGPS1-201ENST00000282841 DALRD3Q5D0E6 543 aaKnown RBP12.76□□□□□ -0.37
GGPS1-201ENST00000282841 VPS54Q9P1Q0 977 aa12.76□□□□□ -0.37
GGPS1-201ENST00000282841 SNED1Q8TER0 1413 aa12.76□□□□□ -0.37
GGPS1-201ENST00000282841 TCP10L2B9ZVM9 353 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 MPHOSPH10O00566 681 aaKnown RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 ADAMTS3O15072 1205 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 AKR1B1P15121 316 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 LEO1Q8WVC0 666 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 PANK2Q9BZ23 570 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CDK5RAP2Q96SN8 1893 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 PLCG2P16885 1265 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 LIG1P18858 919 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CAMK4Q16566 473 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CPLX2Q6PUV4 134 aaKnown RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CEP95Q96GE4 821 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 KAT14Q9H8E8 782 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CLIC4Q9Y696 253 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 NR5A1Q13285 461 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 GNL2Q13823 731 aaKnown RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 NOM1Q5C9Z4 860 aaKnown RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 CCDC125Q86Z20 511 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
GGPS1-201ENST00000282841 PGBD1Q96JS3 809 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
GGPS1-201ENST00000282841 BTBD18B2RXH4 712 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 TMTC2Q8N394 836 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms