RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 TMC6Q7Z403 805 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 TICAM2Q86XR7 235 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 TBC1D22AQ8WUA7 517 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 ZKSCAN5Q9Y2L8 839 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.29□□□□□ -0.764e-8■■□□□ 11.8
SEC16A-201ENST00000277537 ELP1O95163 1332 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 GUCY1A2P33402 732 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 STX17P56962 302 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 ENAHQ8N8S7 591 aaPredicted RBP10.28□□□□□ -0.76
SEC16A-201ENST00000277537 TMEM87AQ8NBN3 555 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 LINC00301Q8NCQ3 95 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 CPVLQ9H3G5 476 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 BCL2L12Q9HB09 334 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 KDM3BQ7LBC6 1761 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 IFNAR1P17181 557 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
SEC16A-201ENST00000277537 IGDCC4Q8TDY8 1250 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 DACH1Q9UI36 760 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 CACNB3P54284 484 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 ALX1Q15699 326 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 LETM2Q2VYF4 491 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 CCAR2Q8N163 923 aaKnown RBP10.28□□□□□ -0.76
SEC16A-201ENST00000277537 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
SEC16A-201ENST00000277537 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 RASGRP4Q8TDF6 673 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 UBA5Q9GZZ9 404 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 LRRC4BQ9NT99 713 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
SEC16A-201ENST00000277537 PHRF1Q9P1Y6 1649 aaKnown RBP10.28□□□□□ -0.76
SEC16A-201ENST00000277537 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
SEC16A-201ENST00000277537 KIF28PB7ZC32 967 aa10.27□□□□□ -0.76
SEC16A-201ENST00000277537 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.76
SEC16A-201ENST00000277537 ADRA2BP18089 450 aa10.27□□□□□ -0.76
SEC16A-201ENST00000277537 PNOCQ13519 176 aa10.27□□□□□ -0.76
SEC16A-201ENST00000277537 CPLX3Q8WVH0 158 aa10.27□□□□□ -0.76
SEC16A-201ENST00000277537 RIC1Q4ADV7 1423 aa10.27□□□□□ -0.76
SEC16A-201ENST00000277537 VIRMAQ69YN4 1812 aaKnown RBP10.27□□□□□ -0.76
SEC16A-201ENST00000277537 GYS1P13807 737 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 FRMPD2Q68DX3 1309 aaPredicted RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 FBXO33Q7Z6M2 555 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 RRP36Q96EU6 259 aaKnown RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 C16orf45Q96MC5 204 aaPredicted RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 MRVI1Q9Y6F6 885 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 KRT18P05783 430 aaKnown RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 CALML3P27482 149 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 JAKMIP3Q5VZ66 844 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 CCDC148Q8NFR7 591 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 BRIP1Q9BX63 1249 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 KCPQ6ZWJ8 1503 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 PPIP5K2O43314 1243 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 SFPQP23246 707 aaKnown RBP eCLIP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 TNNI2P48788 182 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 RBM6P78332 1123 aaKnown RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 FILIP1LQ4L180 1135 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 TRMT1LQ7Z2T5 733 aaKnown RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 CCDC12Q8WUD4 166 aaPredicted RBP10.27□□□□□ -0.77
SEC16A-201ENST00000277537 TEKT1Q969V4 418 aa10.27□□□□□ -0.77
SEC16A-201ENST00000277537 PNPLA7Q6ZV29 1317 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 TCRBV5S4A2TA0A5A2 114 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 CAVIN2O95810 425 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 ZNF76P36508 570 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 SLC39A14Q15043 492 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 TCP11L1Q9NUJ3 509 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 IFNKQ9P0W0 207 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 ROBO1Q9Y6N7 1651 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 UQCRHLA0A096LP55 91 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 KLRF2D3W0D1 207 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 UQCRHP07919 91 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 TPM2P07951 284 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 ZNF827Q17R98 1081 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 SLC27A3Q5K4L6 730 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 SLC10A5Q5PT55 438 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 OXER1Q8TDS5 423 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 GOLPH3LQ9H4A5 285 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 CUTAO60888 179 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 IDEP14735 1019 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 LARGE2Q8N3Y3 721 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 PPP1R9BQ96SB3 815 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 POLR3EQ9NVU0 708 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 MAPK8IP1Q9UQF2 711 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 PCDHB6Q9Y5E3 794 aa10.26□□□□□ -0.77
SEC16A-201ENST00000277537 SCN11AQ9UI33 1791 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 MMP1P03956 469 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 SCG2P13521 617 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 UBASH3AP57075 661 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 EN1Q05925 392 aaPredicted RBP10.25□□□□□ -0.77
SEC16A-201ENST00000277537 PPP2R5BQ15173 497 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 USP17L2Q6R6M4 530 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 C6orf50Q9HD87 102 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 TCEAL9Q9UHQ7 104 aa10.25□□□□□ -0.77
SEC16A-201ENST00000277537 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms