RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 AMOTL1Q8IY63 956 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 ENGASEQ8NFI3 743 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 ZNF622Q969S3 477 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM55-201ENST00000276573 DYNLL2Q96FJ2 89 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 PDLIM2Q96JY6 352 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 CAMKK2Q96RR4 588 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
TRIM55-201ENST00000276573 TMX4Q9H1E5 349 aaPredicted RBP11.11□□□□□ -0.63
TRIM55-201ENST00000276573 GOLPH3LQ9H4A5 285 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 SUGT1Q9Y2Z0 365 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 NMT2O60551 498 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 MMP1P03956 469 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 PLCD1P51178 756 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 RHBDL3P58872 404 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 TFAP4Q01664 338 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 SNW1Q13573 536 aaKnown RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 GNL2Q13823 731 aaKnown RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 SAFBQ15424 915 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 SLC4A8Q2Y0W8 1093 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 RCSD1Q6JBY9 416 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 C2CD5Q86YS7 1000 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 TEX11Q8IYF3 940 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 ANKS1AQ92625 1134 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 MKNK2Q9HBH9 465 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 LAMB1P07942 1786 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 EP400Q96L91 3159 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 TNS1Q9HBL0 1735 aaKnown RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 ROBO3Q96MS0 1386 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 H0YIN7 160 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 CCDC178Q5BJE1 867 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 STYK1Q6J9G0 422 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 CCDC73Q6ZRK6 1079 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 CKAP2LQ8IYA6 745 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 ZNF444Q8N0Y2 327 aaPredicted RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 FSIP1Q8NA03 581 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 IL17RBQ9NRM6 502 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
TRIM55-201ENST00000276573 KCNJ14Q9UNX9 436 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 DLEC1Q9Y238 1755 aa11.1□□□□□ -0.63
TRIM55-201ENST00000276573 BTBD18B2RXH4 712 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 CTAGE5O15320 804 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 EN1Q05925 392 aaPredicted RBP11.09□□□□□ -0.63
TRIM55-201ENST00000276573 FAM160A1Q05DH4 1040 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 PKN1Q16512 942 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 TMTC3Q6ZXV5 915 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 MRPS27Q92552 414 aaKnown RBP11.09□□□□□ -0.63
TRIM55-201ENST00000276573 TRIM44Q96DX7 344 aaPredicted RBP11.09□□□□□ -0.63
TRIM55-201ENST00000276573 EYA3Q99504 573 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
TRIM55-201ENST00000276573 TCP11L1Q9NUJ3 509 aa11.09□□□□□ -0.63
TRIM55-201ENST00000276573 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
TRIM55-201ENST00000276573 PPP6R2O75170 966 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 TYRO3Q06418 890 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 PTPAQ15257 358 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 AXDND1Q5T1B0 1012 aaPredicted RBP11.08□□□□□ -0.64
TRIM55-201ENST00000276573 NOSTRINQ8IVI9 506 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 DIS3L2Q8IYB7 885 aaKnown RBP11.08□□□□□ -0.64
TRIM55-201ENST00000276573 CERS5Q8N5B7 392 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 SRBD1Q8N5C6 995 aaKnown RBP11.08□□□□□ -0.64
TRIM55-201ENST00000276573 MAP3K14Q99558 947 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 FOXP1Q9H334 677 aaPredicted RBP11.08□□□□□ -0.64
TRIM55-201ENST00000276573 STK32BQ9NY57 414 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 ECM29Q5VYK3 1845 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 RGPD3A6NKT7 1758 aaPredicted RBP11.08□□□□□ -0.64
TRIM55-201ENST00000276573 RGPD4Q7Z3J3 1758 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 G3V3G9 751 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 RASA1P20936 1047 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 CDK8P49336 464 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 DCAF8Q5TAQ9 597 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 SASS6Q6UVJ0 657 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 FMR1NBQ8N0W7 255 aaPredicted RBP11.08□□□□□ -0.64
TRIM55-201ENST00000276573 CTCFLQ8NI51 663 aaPredicted RBP11.08□□□□□ -0.64
TRIM55-201ENST00000276573 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 MRVI1Q9Y6F6 885 aa11.08□□□□□ -0.64
TRIM55-201ENST00000276573 A0A1B0GVL5 298 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
TRIM55-201ENST00000276573 WDHD1O75717 1129 aaPredicted RBP11.07□□□□□ -0.64
TRIM55-201ENST00000276573 XBP1P17861 261 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 CMA1P23946 247 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 C16orf86Q6ZW13 317 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 SHISA4Q96DD7 197 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.07□□□□□ -0.64
TRIM55-201ENST00000276573 FLT1P17948 1338 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 COL11A2P13942 1736 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms