RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 STAP2Q9UGK3 403 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 HOOK1Q9UJC3 728 aaKnown RBP10.39□□□□□ -0.75
PDGFC-201ENST00000274071 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 BUB1BO60566 1050 aaPredicted RBP10.39□□□□□ -0.75
PDGFC-201ENST00000274071 IFFO1Q0D2I5 559 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 WHAMMP3Q1A5X7 153 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 PDILTQ8N807 584 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 SELENOOQ9BVL4 669 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 EPN3Q9H201 632 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 ACTR5Q9H9F9 607 aaPredicted RBP10.39□□□□□ -0.75
PDGFC-201ENST00000274071 C15orf41Q9Y2V0 281 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 A0A1B0GVL5 298 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 A6NHS1 94 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 ZMYND10O75800 440 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 ANP32DO95626 131 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 A1BGP04217 495 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 CCDC175P0C221 793 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 USP14P54578 494 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 TBX2Q13207 712 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 Q6ZUG5 572 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 ACRBPQ8NEB7 543 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 ZNF570Q96NI8 536 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 NOD2Q9HC29 1040 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 GGA2Q9UJY4 613 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 TUBGCP6Q96RT7 1819 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 CBFA2T2O43439 604 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 LSP1P33241 339 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 MFSD4BQ5TF39 518 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 GSPT2Q8IYD1 628 aaKnown RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 FSIP1Q8NA03 581 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 RBM17Q96I25 401 aaKnown RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 TSC22D3Q99576 134 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 OSBPL7Q9BZF2 842 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 MMADHCQ9H3L0 296 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 ACEP12821 1306 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 GOLGA8KD6RF30 607 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 TPD52L2O43399 206 aaKnown RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 UPP2O95045 317 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 ATP6V1G2O95670 118 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 NCAPH2Q6IBW4 605 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 FMR1NBQ8N0W7 255 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 CUL5Q93034 780 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 BICD1Q96G01 975 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 CCT8L2Q96SF2 557 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 GORASP1Q9BQQ3 440 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 TM6SF1Q9BZW5 370 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 TSPYL2Q9H2G4 693 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-201ENST00000274071 INTS13Q9NVM9 706 aa10.38□□□□□ -0.75
PDGFC-201ENST00000274071 MON2Q7Z3U7 1717 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 IKBKBO14920 756 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 ATP1A2P50993 1020 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 XRCC4Q13426 336 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 DBN1Q16643 649 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
PDGFC-201ENST00000274071 CCDC121Q6ZUS5 278 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 SLC35F6Q8N357 371 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 GALNT15Q8N3T1 639 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 ITSN1Q15811 1721 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 PLEKHG3A1L390 1219 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 MYBL1P10243 752 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 ATP4AP20648 1035 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 MCM3P25205 808 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 SEC24CP53992 1094 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 HDLBPQ00341 1268 aaKnown RBP10.37□□□□□ -0.75
PDGFC-201ENST00000274071 BLMHQ13867 455 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 RRS1Q15050 365 aaKnown RBP10.37□□□□□ -0.75
PDGFC-201ENST00000274071 ARL8AQ96BM9 186 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
PDGFC-201ENST00000274071 POLD4Q9HCU8 107 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 MYO1AQ9UBC5 1043 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 BAIAP2L1Q9UHR4 511 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 L3MBTL1Q9Y468 752 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 ADGRG1Q9Y653 693 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 AKAP12Q02952 1782 aa10.37□□□□□ -0.75
PDGFC-201ENST00000274071 NPHP4O75161 1426 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-201ENST00000274071 SMIM24O75264 130 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 NLRP12P59046 1061 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 TMEM62Q0P6H9 643 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 RASA3Q14644 834 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 ARHGEF25Q86VW2 580 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 SOWAHDA6NJG2 315 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 LIN7AO14910 233 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-201ENST00000274071 OPA1O60313 960 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 GUCY1A3Q02108 690 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 TTMPQ5BVD1 217 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 SPECC1Q5M775 1068 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 CCNI2Q6ZMN8 369 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-201ENST00000274071 KIAA0825Q8IV33 1275 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 MYCBPAPQ8TBZ2 947 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 ZFAND2BQ8WV99 257 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 LZTS2Q9BRK4 669 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 TRIM4Q9C037 500 aa10.36□□□□□ -0.75
PDGFC-201ENST00000274071 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms