RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 SARM1Q6SZW1 724 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.23■■□□□ 1.31
RAB5A-201ENST00000273047 ANAPC4Q9UJX5 808 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 MYH6P13533 1939 aa23.22■■□□□ 1.31
RAB5A-201ENST00000273047 DEXIO95424 95 aa23.22■■□□□ 1.31
RAB5A-201ENST00000273047 FOXP4Q8IVH2 680 aaPredicted RBP23.22■■□□□ 1.31
RAB5A-201ENST00000273047 NAT10Q9H0A0 1025 aaKnown RBP23.22■■□□□ 1.31
RAB5A-201ENST00000273047 V9GY48 417 aaPredicted RBP23.22■■□□□ 1.31
RAB5A-201ENST00000273047 SAFBQ15424 915 aaKnown RBP eCLIP23.22■■□□□ 1.31
RAB5A-201ENST00000273047 PTPN21Q16825 1174 aa23.22■■□□□ 1.31
RAB5A-201ENST00000273047 RESP18Q5W5W9 173 aa23.22■■□□□ 1.31
RAB5A-201ENST00000273047 C16orf45Q96MC5 204 aaPredicted RBP23.22■■□□□ 1.31
RAB5A-201ENST00000273047 DCP1AQ9NPI6 582 aaPredicted RBP23.22■■□□□ 1.31
RAB5A-201ENST00000273047 ANKIB1Q9P2G1 1089 aa23.22■■□□□ 1.31
RAB5A-201ENST00000273047 LMOD1P29536 600 aaPredicted RBP23.21■■□□□ 1.31
RAB5A-201ENST00000273047 GRIK5Q16478 980 aa23.21■■□□□ 1.31
RAB5A-201ENST00000273047 USP49Q70CQ1 688 aa23.21■■□□□ 1.31
RAB5A-201ENST00000273047 TMTC2Q8N394 836 aa23.21■■□□□ 1.31
RAB5A-201ENST00000273047 PDILTQ8N807 584 aa23.21■■□□□ 1.31
RAB5A-201ENST00000273047 METTL16Q86W50 562 aaKnown RBP23.21■■□□□ 1.31
RAB5A-201ENST00000273047 WASF1Q92558 559 aa23.21■■□□□ 1.31
RAB5A-201ENST00000273047 KCNH3Q9ULD8 1083 aa23.21■■□□□ 1.31
RAB5A-201ENST00000273047 WNT7AO00755 349 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 RFC4P35249 363 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 NLRP12P59046 1061 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 PKN1Q16512 942 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 LRRC8AQ8IWT6 810 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 GRAMD1CQ8IYS0 662 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 JMYQ8N9B5 988 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 BRIP1Q9BX63 1249 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 DUOX1Q9NRD9 1551 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 ATP1A3P13637 1013 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 VEGFAP15692 232 aaPredicted RBP23.2■■□□□ 1.3
RAB5A-201ENST00000273047 HSP90AA4PQ58FG1 418 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 RC3H1Q5TC82 1133 aaKnown RBP23.2■■□□□ 1.3
RAB5A-201ENST00000273047 FAM196AQ6ZSG2 479 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 MRFAP1L1Q96HT8 127 aa23.2■■□□□ 1.3
RAB5A-201ENST00000273047 CCDC196A0A1B0GTZ2 297 aa23.19■■□□□ 1.3
RAB5A-201ENST00000273047 SMC2O95347 1197 aa23.19■■□□□ 1.3
RAB5A-201ENST00000273047 USP17L8P0C7I0 530 aa23.19■■□□□ 1.3
RAB5A-201ENST00000273047 GTPBP4Q9BZE4 634 aaKnown RBP23.19■■□□□ 1.3
RAB5A-201ENST00000273047 BCL11BQ9C0K0 894 aaPredicted RBP23.19■■□□□ 1.3
RAB5A-201ENST00000273047 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.19■■□□□ 1.3
RAB5A-201ENST00000273047 IFNKQ9P0W0 207 aa23.19■■□□□ 1.3
RAB5A-201ENST00000273047 NID2Q14112 1375 aa23.19■■□□□ 1.3
RAB5A-201ENST00000273047 NCAPHQ15003 741 aa23.19■■□□□ 1.3
RAB5A-201ENST00000273047 FNBP4Q8N3X1 1017 aaPredicted RBP23.19■■□□□ 1.3
RAB5A-201ENST00000273047 KRI1Q8N9T8 703 aaKnown RBP23.19■■□□□ 1.3
RAB5A-201ENST00000273047 CNNM3Q8NE01 707 aa23.19■■□□□ 1.3
RAB5A-201ENST00000273047 XPO4Q9C0E2 1151 aaKnown RBP23.19■■□□□ 1.3
RAB5A-201ENST00000273047 RIOK3O14730 519 aaKnown RBP23.18■■□□□ 1.3
RAB5A-201ENST00000273047 TROAPQ12815 778 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 DIXDC1Q155Q3 683 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 IQCA1Q86XH1 822 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 PDCL2Q8N4E4 241 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 USP27XA6NNY8 438 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 CUTAO60888 179 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 CDC25BP30305 580 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 CATIPQ7Z7H3 387 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 TNRC6CQ9HCJ0 1690 aaKnown RBP23.18■■□□□ 1.3
RAB5A-201ENST00000273047 LRRC4BQ9NT99 713 aa23.18■■□□□ 1.3
RAB5A-201ENST00000273047 ADAMTS3O15072 1205 aa23.17■■□□□ 1.3
RAB5A-201ENST00000273047 POLR2DO15514 142 aaKnown RBP23.17■■□□□ 1.3
RAB5A-201ENST00000273047 AKAP17AQ02040 695 aaKnown RBP23.17■■□□□ 1.3
RAB5A-201ENST00000273047 FUT2Q10981 343 aa23.17■■□□□ 1.3
RAB5A-201ENST00000273047 FBXO2Q9UK22 296 aaPredicted RBP23.17■■□□□ 1.3
RAB5A-201ENST00000273047 PCDHA5Q9Y5H7 936 aa23.17■■□□□ 1.3
RAB5A-201ENST00000273047 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
RAB5A-201ENST00000273047 FOXP1Q9H334 677 aaPredicted RBP23.17■■□□□ 1.3
RAB5A-201ENST00000273047 MCM9Q9NXL9 1143 aa23.17■■□□□ 1.3
RAB5A-201ENST00000273047 KRBA2Q6ZNG9 492 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 DZIP1Q86YF9 867 aaKnown RBP23.16■■□□□ 1.3
RAB5A-201ENST00000273047 DYNLL2Q96FJ2 89 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 ANKRD2Q9GZV1 360 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 HSD3B7Q9H2F3 369 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 MTMR7Q9Y216 660 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 SPDYE4A6NLX3 237 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 PRR29P0C7W0 189 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 BMP6P22004 513 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 TRAPPC3LQ5T215 181 aa23.16■■□□□ 1.3
RAB5A-201ENST00000273047 CRNKL1Q9BZJ0 848 aaKnown RBP23.16■■□□□ 1.3
RAB5A-201ENST00000273047 ZNF827Q17R98 1081 aa23.15■■□□□ 1.3
RAB5A-201ENST00000273047 PDE4BQ07343 736 aa23.15■■□□□ 1.3
RAB5A-201ENST00000273047 SRBD1Q8N5C6 995 aaKnown RBP23.15■■□□□ 1.3
RAB5A-201ENST00000273047 ANKRD7Q92527 254 aa23.15■■□□□ 1.3
RAB5A-201ENST00000273047 RNF26Q9BY78 433 aaPredicted RBP23.15■■□□□ 1.3
RAB5A-201ENST00000273047 PODXL2Q9NZ53 605 aa23.15■■□□□ 1.3
RAB5A-201ENST00000273047 TUBE1Q9UJT0 475 aa23.15■■□□□ 1.3
RAB5A-201ENST00000273047 ZNF831Q5JPB2 1677 aa23.14■■□□□ 1.3
RAB5A-201ENST00000273047 SKILP12757 684 aa23.14■■□□□ 1.3
RAB5A-201ENST00000273047 RILPL1Q5EBL4 403 aa23.14■■□□□ 1.3
RAB5A-201ENST00000273047 TIGD1Q96MW7 591 aa23.14■■□□□ 1.3
RAB5A-201ENST00000273047 CSRNP2Q9H175 543 aa23.14■■□□□ 1.3
RAB5A-201ENST00000273047 SERTAD1Q9UHV2 236 aa23.14■■□□□ 1.3
RAB5A-201ENST00000273047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.14■■□□□ 1.3
RAB5A-201ENST00000273047 TRMT1Q9NXH9 659 aaKnown RBP23.14■■□□□ 1.29
RAB5A-201ENST00000273047 SEMA3EO15041 775 aa23.13■■□□□ 1.29
RAB5A-201ENST00000273047 PTPREP23469 700 aa23.13■■□□□ 1.29
RAB5A-201ENST00000273047 TMC6Q7Z403 805 aa23.13■■□□□ 1.29
RAB5A-201ENST00000273047 RGS22Q8NE09 1264 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms