RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 NBPF3Q9H094 633 aa17.37■□□□□ 0.37
COMMD4-201ENST00000267935 DOCK3Q8IZD9 2030 aa17.37■□□□□ 0.37
COMMD4-201ENST00000267935 CYP2E1P05181 493 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-201ENST00000267935 MAPK4P31152 587 aa17.36■□□□□ 0.37
COMMD4-201ENST00000267935 RRP1BQ14684 758 aaKnown RBP17.36■□□□□ 0.37
COMMD4-201ENST00000267935 TMED8Q6PL24 325 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-201ENST00000267935 METTL16Q86W50 562 aaKnown RBP17.36■□□□□ 0.37
COMMD4-201ENST00000267935 SOCS4Q8WXH5 440 aa17.36■□□□□ 0.37
COMMD4-201ENST00000267935 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
COMMD4-201ENST00000267935 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
COMMD4-201ENST00000267935 PTPRFP10586 1907 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 XRCC5P13010 732 aaKnown RBP17.35■□□□□ 0.37
COMMD4-201ENST00000267935 CYP2B6P20813 491 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 CYP7A1P22680 504 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 USP5P45974 858 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 HERVK_113P62684 666 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 USP17L2Q6R6M4 530 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
COMMD4-201ENST00000267935 FLT1P17948 1338 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 PHIPQ8WWQ0 1821 aa17.35■□□□□ 0.37
COMMD4-201ENST00000267935 GLRX3O76003 335 aaKnown RBP17.34■□□□□ 0.37
COMMD4-201ENST00000267935 ZAP70P43403 619 aa17.34■□□□□ 0.37
COMMD4-201ENST00000267935 TTC6Q86TZ1 520 aa17.34■□□□□ 0.37
COMMD4-201ENST00000267935 PRO3102Q9H379 93 aa17.34■□□□□ 0.37
COMMD4-201ENST00000267935 TNNQ9UQP3 1299 aa17.34■□□□□ 0.37
COMMD4-201ENST00000267935 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
COMMD4-201ENST00000267935 CCNA1P78396 465 aa17.33■□□□□ 0.36
COMMD4-201ENST00000267935 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
COMMD4-201ENST00000267935 STAP2Q9UGK3 403 aa17.33■□□□□ 0.36
COMMD4-201ENST00000267935 SAP30BPQ9UHR5 308 aaKnown RBP17.33■□□□□ 0.36
COMMD4-201ENST00000267935 ZBTB21Q9ULJ3 1066 aa17.33■□□□□ 0.36
COMMD4-201ENST00000267935 GDF11O95390 407 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 RGS2P41220 211 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 USP14P54578 494 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 ERVK-9P63128 1117 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 ERVK-24P63145 666 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 FEZ1Q99689 392 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-201ENST00000267935 C11orf49Q9H6J7 331 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 CABP5Q9NP86 173 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
COMMD4-201ENST00000267935 OGDHLQ9ULD0 1010 aa17.32■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 ZKSCAN1P17029 563 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-201ENST00000267935 BMP8BP34820 402 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 PLEKHH3Q7Z736 793 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 ERC1Q8IUD2 1116 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 RBPJLQ9UBG7 517 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 SERPINB13Q9UIV8 391 aa17.31■□□□□ 0.36
COMMD4-201ENST00000267935 GH2P01242 217 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
COMMD4-201ENST00000267935 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
COMMD4-201ENST00000267935 HSP90AB4PQ58FF6 505 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 DIS3LQ8TF46 1054 aaKnown RBP17.3■□□□□ 0.36
COMMD4-201ENST00000267935 TRIB2Q92519 343 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 DNAJC18Q9H819 358 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 TXNRD2Q9NNW7 524 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 EMILIN3Q9NT22 766 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
COMMD4-201ENST00000267935 RABGAP1Q9Y3P9 1069 aa17.3■□□□□ 0.36
COMMD4-201ENST00000267935 JAG1P78504 1218 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 TRIM32Q13049 653 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 RAB3GAP1Q15042 981 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 TTF1Q15361 905 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-201ENST00000267935 Q3C1V9 767 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 CERKLQ49MI3 558 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-201ENST00000267935 MAP3K21Q5TCX8 1036 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 TATDN1Q6P1N9 297 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 MIGA1Q8NAN2 632 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 EAF2Q96CJ1 260 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-201ENST00000267935 EHD4Q9H223 541 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 C1orf115Q9H7X2 142 aa17.29■□□□□ 0.36
COMMD4-201ENST00000267935 ABCB5Q2M3G0 1257 aa17.28■□□□□ 0.36
COMMD4-201ENST00000267935 MFSD14CQ5VZR4 134 aa17.28■□□□□ 0.36
COMMD4-201ENST00000267935 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
COMMD4-201ENST00000267935 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
COMMD4-201ENST00000267935 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-201ENST00000267935 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
COMMD4-201ENST00000267935 ATAD5Q96QE3 1844 aa17.27■□□□□ 0.36
COMMD4-201ENST00000267935 POLR3DP05423 398 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-201ENST00000267935 CACNB2Q08289 660 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-201ENST00000267935 MORN1Q5T089 497 aa17.27■□□□□ 0.36
COMMD4-201ENST00000267935 WDR78Q5VTH9 848 aa17.27■□□□□ 0.36
COMMD4-201ENST00000267935 APBA2Q99767 749 aa17.27■□□□□ 0.36
COMMD4-201ENST00000267935 GDF15Q99988 308 aa17.27■□□□□ 0.36
COMMD4-201ENST00000267935 KIAA1683Q9H0B3 1180 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms