RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DYNLL1P63167 89 aaKnown RBP10.44□□□□□ -0.74
MSH4-201ENST00000263187 CCDC93Q567U6 631 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 SUSD4Q5VX71 490 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 L2HGDHQ9H9P8 463 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 FBXO2Q9UK22 296 aaPredicted RBP10.44□□□□□ -0.74
MSH4-201ENST00000263187 KIF2AO00139 706 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 PES1O00541 588 aaKnown RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 PLEKHA8P1O95397 391 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 FMNL1O95466 1100 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 CCDC12Q8WUD4 166 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 LPIN2Q92539 896 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 SHISA4Q96DD7 197 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 MRPL44Q9H9J2 332 aaKnown RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 FHOD1Q9Y613 1164 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 PARP3Q9Y6F1 533 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 MYO5AQ9Y4I1 1855 aaKnown RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 PDE8AO60658 829 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 PNMA6AP0CW24 399 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 SLC5A1P13866 664 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 TMCO3Q6UWJ1 677 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 ZNF654Q8IZM8 581 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 TC2NQ8N9U0 490 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 PLIN2Q99541 437 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 CARD10Q9BWT7 1032 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 ADAMTS7Q9UKP4 1686 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 ABL1P00519 1130 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 CYP19A1P11511 503 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 VEGFAP15692 232 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 MDM2Q00987 491 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 TMEM139Q8IV31 216 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 CRACR2BQ8N4Y2 399 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 FANCBQ8NB91 859 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 TIGD1Q96MW7 591 aa10.43□□□□□ -0.74
MSH4-201ENST00000263187 NOL10Q9BSC4 688 aaKnown RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 TEX13AQ9BXU3 409 aaPredicted RBP10.43□□□□□ -0.74
MSH4-201ENST00000263187 MYH15Q9Y2K3 1946 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 ADAMTS3O15072 1205 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 SART3Q15020 963 aaKnown RBP10.42□□□□□ -0.74
MSH4-201ENST00000263187 SPECC1LQ69YQ0 1117 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 RNF216Q9NWF9 866 aaPredicted RBP10.42□□□□□ -0.74
MSH4-201ENST00000263187 TNKSO95271 1327 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 KIF20AO95235 890 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 H2AFXP16104 143 aaPredicted RBP10.42□□□□□ -0.74
MSH4-201ENST00000263187 PLA2G4AP47712 749 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 TRIM28Q13263 835 aaKnown RBP10.42□□□□□ -0.74
MSH4-201ENST00000263187 FAM47AQ5JRC9 791 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 NACAP1Q9BZK3 213 aa10.42□□□□□ -0.74
MSH4-201ENST00000263187 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 IFNAR1P17181 557 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 PTPREP23469 700 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 RBL2Q08999 1139 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 BMS1Q14692 1282 aaKnown RBP10.41□□□□□ -0.74
MSH4-201ENST00000263187 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
MSH4-201ENST00000263187 SGMS1Q86VZ5 419 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 NEK11Q8NG66 645 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 SYMPKQ92797 1274 aaKnown RBP10.41□□□□□ -0.74
MSH4-201ENST00000263187 TJP1Q07157 1748 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 WNK3Q9BYP7 1800 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 ZSCAN12O43309 604 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 PPP2R3AQ06190 1150 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 PPARAQ07869 468 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 WWC2Q6AWC2 1192 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 PLA2G12BQ9BX93 195 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 VPS16Q9H269 839 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.41□□□□□ -0.74
MSH4-201ENST00000263187 GLI3P10071 1580 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 ARHGAP6O43182 974 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 TADA3O75528 432 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 SASH3O75995 380 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
MSH4-201ENST00000263187 IGSF22Q8N9C0 903 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 HINFPQ9BQA5 517 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 KRT23Q9C075 422 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 HOOK1Q9UJC3 728 aaKnown RBP10.41□□□□□ -0.74
MSH4-201ENST00000263187 TFR2Q9UP52 801 aa10.41□□□□□ -0.74
MSH4-201ENST00000263187 MCM7P33993 719 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 LIFRP42702 1097 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 GABPB1Q06547 395 aaPredicted RBP10.4□□□□□ -0.74
MSH4-201ENST00000263187 ACRBPQ8NEB7 543 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 CTNND2Q9UQB3 1225 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 ACTN4O43707 911 aaKnown RBP10.4□□□□□ -0.74
MSH4-201ENST00000263187 DEXIO95424 95 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 CASP14P31944 242 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 ST5P78524 1137 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 RILPL1Q5EBL4 403 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 RAD9BQ6WBX8 426 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 SUGCTQ9HAC7 445 aa10.4□□□□□ -0.74
MSH4-201ENST00000263187 NIP7Q9Y221 180 aaKnown RBP eCLIP10.4□□□□□ -0.74
MSH4-201ENST00000263187 TRIM75PA6NK02 468 aa10.39□□□□□ -0.75
MSH4-201ENST00000263187 DPYDQ12882 1025 aa10.39□□□□□ -0.75
MSH4-201ENST00000263187 MORC3Q14149 939 aa10.39□□□□□ -0.75
MSH4-201ENST00000263187 PPFIBP1Q86W92 1011 aa10.39□□□□□ -0.75
MSH4-201ENST00000263187 RASGRP4Q8TDF6 673 aa10.39□□□□□ -0.75
MSH4-201ENST00000263187 CDC5LQ99459 802 aaKnown RBP10.39□□□□□ -0.75
MSH4-201ENST00000263187 FBXO3Q9UK99 471 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms